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BAM data and FASTQ data were inconsistent #42

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lqsae opened this issue Oct 25, 2022 · 0 comments
Open

BAM data and FASTQ data were inconsistent #42

lqsae opened this issue Oct 25, 2022 · 0 comments

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@lqsae
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lqsae commented Oct 25, 2022 •
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Hi,
RNAseq and WES data of the sample were measured. I was able to successfully use your tool to detect sample mislabelling ; i checked the result with two methods (BAM and FASTQ ) , however, the results analyzed with bam data and FASTQ data were inconsistent.
Can you guide me regarding what I should check up for successfully applying NGSCheckMate to RNAseq and WES ?
Thanks
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