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27 Open 18 Closed
27 Open 18 Closed
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Issues list

Incomplete VAF files?
#53 opened Nov 25, 2024 by dsperley
File "ncm.py", line 1453, in <module> File "ncm.py", line 222, in createDataSetFromDir ZeroDivisionError: float division by zero
#51 opened Mar 10, 2024 by kbarrr
6
ZeroDivisionError: float division by zero
#50 opened Mar 10, 2024 by kbarrr
PNG plot output for vaf_ncm.py
#49 opened Feb 26, 2024 by stevekm
Clustering plot is a flat line now with the version 1.0.0 and 1.0.1
#48 opened Feb 15, 2024 by zhujack
1
the SNP bed file for mouse?
#47 opened Nov 16, 2023 by ls233
Genomic locations of the SNPs in the vaf file
#44 opened May 29, 2023 by ImNotaGit
Is this tool being maintained?
#43 opened May 10, 2023 by NeginValizadegan
1
BAM data and FASTQ data were inconsistent
#42 opened Oct 25, 2022 by lqsae
inconsistent use of tabs and spaces in indentation
#41 opened Apr 5, 2022 by cv55
ValueError: Substring not Found
#40 opened Nov 2, 2021 by amootta
how to prepare the input BED file ?
#39 opened Aug 4, 2021 by hmyh1202
Generating binary pattern files for other tools
#38 opened Jul 8, 2021 by swannyy14
3
function to start with already generated .ncm files?
#36 opened Jan 8, 2021 by imcoleman
3
ZeroDivisionError: float division by zero in math.sqrt(xdiff2 * ydiff2)
#35 opened Oct 28, 2020 by elagina
samtools mpileup is deprecated
#32 opened Jun 9, 2020 by golharam
ngscheckmate2xgmml.R references non-existent R file
#30 opened Mar 28, 2020 by golharam
missing the last sample in output_corr_matrix.txt
#28 opened Mar 5, 2020 by zhujack
Allow reference genome file location to be specified at runtime
#26 opened Nov 22, 2019 by SPPearce
VCF files to use
#25 opened Oct 31, 2019 by plbngl
1
Does this software only support python2.x ?
#24 opened Oct 15, 2019 by yanglq-bio
bgzip vcfs
#23 opened Sep 23, 2019 by robrollback
correlation matrix
#22 opened Apr 2, 2019 by misbahch6
On non-human species
#21 opened Jan 28, 2019 by tderrien
new release?
#20 opened Jan 18, 2019 by 0xaf1f
1
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