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Updated Dockerfile
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@dvantwisk
dvantwisk committed Nov 4, 2024
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3 changes: 2 additions & 1 deletion Dockerfile
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Expand Up @@ -40,7 +40,8 @@ RUN wget https://www.niehs.nih.gov/sites/default/files/2024-02/artbinmountrainie

FROM rocker/r-ver:4.4.0

RUN Rscript -e "install.packages('BiocManager', dependencies=TRUE, repos='http://cran.rstudio.com/')"
RUN Rscript -e "install.packages('BiocManager', dependencies=TRUE, repos='http://cran.rstudio.com/')" && \
Rscript -e "BiocManager::install('curl')"
# Rscript -e "BiocManager::install(c('GenomicFeatures', 'Biostrings', 'biomaRt', 'rtracklayer', 'stringr', 'ggplot2', 'patchwork', 'cowplot'),dependencies=TRUE')"

#FROM mambaorg/micromamba:2.0.2 AS Micromamba
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