Skip to content

Commit

Permalink
Updated Dockerfile
Browse files Browse the repository at this point in the history
  • Loading branch information
@dvantwisk
dvantwisk committed Nov 4, 2024
1 parent 806d699 commit 74ff60e
Showing 1 changed file with 2 additions and 1 deletion.
3 changes: 2 additions & 1 deletion Dockerfile
View file
Original file line number Diff line number Diff line change
Expand Up @@ -40,8 +40,9 @@ RUN wget https://www.niehs.nih.gov/sites/default/files/2024-02/artbinmountrainie

FROM rocker/r-ver:4.4.0

RUN R -q -e 'install.packages("curl")'
RUN Rscript -e "install.packages('BiocManager', dependencies=TRUE, repos='http://cran.rstudio.com/')" && \
Rscript -e "BiocManager::install('GenomicFeatures')"
Rscript -e "BiocManager::install('GenomicFeatures', 'Biostrings', biomaRt', 'rtracklayer', 'stringr', 'ggplot2', 'patchwork', 'cowplot')"
# Rscript -e "BiocManager::install(c('GenomicFeatures', 'Biostrings', 'biomaRt', 'rtracklayer', 'stringr', 'ggplot2', 'patchwork', 'cowplot'),dependencies=TRUE')"

#FROM mambaorg/micromamba:2.0.2 AS Micromamba
Expand Down

0 comments on commit 74ff60e

Please sign in to comment.