update MPI versions and fix Travis CI issues

install autotools on macos using brew update to latest MPI release downloads add autogen.sh since mpich github releases no ship with configure stupid useless github tarballs accept automake >= 1.15 silence excessive output from Open-MPI mpi.h
pmodels · Dec 2, 2019 · 2f90528 · 2f90528
1 parent ec5d915
commit 2f90528
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Showing 4 changed files with 128 additions and 119 deletions.
diff --git a/autogen.sh b/autogen.sh
@@ -14,7 +14,7 @@ check_autotools_version()
     tool=$1
     req_ver=$2
     curr_ver=$($tool --version | head -1 | cut -f4 -d' ' | xargs echo -n)
-    if [ "$curr_ver" != "$req_ver" ]; then
+    if [ "$curr_ver" -ge "$req_ver" ]; then
         echo ""
         echo "$tool version mismatch ($req_ver) required"
         exit

diff --git a/travis/build-run.sh b/travis/build-run.sh
@@ -29,12 +29,14 @@ case "$MPI_IMPL" in
         mpicc --showme:command
         # see https://github.com/open-mpi/ompi/issues/2956
         export TMPDIR=/tmp
+        # suppress excessive output
+        OMPI_NO_WARN="-Wno-unknown-attributes"
         ;;
 esac
 
 # Configure and build
 ./autogen.sh
-./configure CC=mpicc CFLAGS="-std=c99" --disable-static --prefix=/tmp
+./configure CC=mpicc CFLAGS="-std=c99 $OMPI_NO_WARN" --disable-static --prefix=/tmp
 make V=1
 make V=1 install
 

diff --git a/travis/install-autotools.sh b/travis/install-autotools.sh
@@ -3,120 +3,128 @@
 #set -e
 set -x
 
-os=`uname`
 TOP="$1"
 
-      MAKE_JNUM=2
-      M4_VERSION=1.4.17
-      LIBTOOL_VERSION=2.4.6
-      AUTOCONF_VERSION=2.69
-      AUTOMAKE_VERSION=1.15
+M4_VERSION=1.4.17
+LIBTOOL_VERSION=2.4.6
+AUTOCONF_VERSION=2.69
+AUTOMAKE_VERSION=1.15
 
-      cd ${TOP}
-      TOOL=m4
-      TDIR=${TOOL}-${M4_VERSION}
-      FILE=${TDIR}.tar.gz
-      BIN=${TOP}/bin/${TOOL}
-      if [ -f ${FILE} ] ; then
-        echo ${FILE} already exists! Using existing copy.
-      else
-        wget http://ftp.gnu.org/gnu/${TOOL}/${FILE}
-      fi
-      if [ -d ${TDIR} ] ; then
-        echo ${TDIR} already exists! Using existing copy.
-      else
-        echo Unpacking ${FILE}
-        tar -xzf ${FILE}
-      fi
-      if [ -f ${BIN} ] ; then
-        echo ${BIN} already exists! Skipping build.
-      else
-        cd ${TOP}/${TDIR}
-        ./configure --prefix=${TOP} && make -j ${MAKE_JNUM} && make install
-        if [ "x$?" != "x0" ] ; then
-          echo FAILURE 1
-          exit
-        fi
-      fi
+if [[ "$TRAVIS_OS_NAME" == "osx" ]]; then
 
-      cd ${TOP}
-      TOOL=libtool
-      TDIR=${TOOL}-${LIBTOOL_VERSION}
-      FILE=${TDIR}.tar.gz
-      BIN=${TOP}/bin/${TOOL}
-      if [ ! -f ${FILE} ] ; then
-        wget http://ftp.gnu.org/gnu/${TOOL}/${FILE}
-      else
-        echo ${FILE} already exists! Using existing copy.
-      fi
-      if [ ! -d ${TDIR} ] ; then
-        echo Unpacking ${FILE}
-        tar -xzf ${FILE}
-      else
-        echo ${TDIR} already exists! Using existing copy.
-      fi
-      if [ -f ${BIN} ] ; then
-        echo ${BIN} already exists! Skipping build.
-      else
-        cd ${TOP}/${TDIR}
-        ./configure --prefix=${TOP} M4=${TOP}/bin/m4 && make -j ${MAKE_JNUM} && make install
-        if [ "x$?" != "x0" ] ; then
-          echo FAILURE 2
-          exit
-        fi
-      fi
+  brew install m4       || brew upgrade m4
+  brew install libtool  || brew upgrade libtool
+  brew install autoconf || brew upgrade autoconf
+  brew install automake || brew upgrade automake
 
-      cd ${TOP}
-      TOOL=autoconf
-      TDIR=${TOOL}-${AUTOCONF_VERSION}
-      FILE=${TDIR}.tar.gz
-      BIN=${TOP}/bin/${TOOL}
-      if [ ! -f ${FILE} ] ; then
-        wget http://ftp.gnu.org/gnu/${TOOL}/${FILE}
-      else
-        echo ${FILE} already exists! Using existing copy.
-      fi
-      if [ ! -d ${TDIR} ] ; then
-        echo Unpacking ${FILE}
-        tar -xzf ${FILE}
-      else
-        echo ${TDIR} already exists! Using existing copy.
-      fi
-      if [ -f ${BIN} ] ; then
-        echo ${BIN} already exists! Skipping build.
-      else
-        cd ${TOP}/${TDIR}
-        ./configure --prefix=${TOP} M4=${TOP}/bin/m4 && make -j ${MAKE_JNUM} && make install
-        if [ "x$?" != "x0" ] ; then
-          echo FAILURE 3
-          exit
-        fi
-      fi
+else
+  MAKE_JNUM=2
 
-      cd ${TOP}
-      TOOL=automake
-      TDIR=${TOOL}-${AUTOMAKE_VERSION}
-      FILE=${TDIR}.tar.gz
-      BIN=${TOP}/bin/${TOOL}
-      if [ ! -f ${FILE} ] ; then
-        wget http://ftp.gnu.org/gnu/${TOOL}/${FILE}
-      else
-        echo ${FILE} already exists! Using existing copy.
-      fi
-      if [ ! -d ${TDIR} ] ; then
-        echo Unpacking ${FILE}
-        tar -xzf ${FILE}
-        else
-          echo ${TDIR} already exists! Using existing copy.
-        fi
-        if [ -f ${BIN} ] ; then
-          echo ${BIN} already exists! Skipping build.
-        else
-          cd ${TOP}/${TDIR}
-          ./configure --prefix=${TOP} M4=${TOP}/bin/m4 && make -j ${MAKE_JNUM} && make install
-          if [ "x$?" != "x0" ] ; then
-            echo FAILURE 4
-            exit
-          fi
-        fi
+  cd ${TOP}
+  TOOL=m4
+  TDIR=${TOOL}-${M4_VERSION}
+  FILE=${TDIR}.tar.gz
+  BIN=${TOP}/bin/${TOOL}
+  if [ -f ${FILE} ] ; then
+    echo ${FILE} already exists! Using existing copy.
+  else
+    wget http://ftp.gnu.org/gnu/${TOOL}/${FILE}
+  fi
+  if [ -d ${TDIR} ] ; then
+    echo ${TDIR} already exists! Using existing copy.
+  else
+    echo Unpacking ${FILE}
+    tar -xzf ${FILE}
+  fi
+  if [ -f ${BIN} ] ; then
+    echo ${BIN} already exists! Skipping build.
+  else
+    cd ${TOP}/${TDIR}
+    ./configure --prefix=${TOP} && make -j ${MAKE_JNUM} && make install
+    if [ "x$?" != "x0" ] ; then
+      echo FAILURE 1
+      exit
+    fi
+  fi
 
+  cd ${TOP}
+  TOOL=libtool
+  TDIR=${TOOL}-${LIBTOOL_VERSION}
+  FILE=${TDIR}.tar.gz
+  BIN=${TOP}/bin/${TOOL}
+  if [ ! -f ${FILE} ] ; then
+    wget http://ftp.gnu.org/gnu/${TOOL}/${FILE}
+  else
+    echo ${FILE} already exists! Using existing copy.
+  fi
+  if [ ! -d ${TDIR} ] ; then
+    echo Unpacking ${FILE}
+    tar -xzf ${FILE}
+  else
+    echo ${TDIR} already exists! Using existing copy.
+  fi
+  if [ -f ${BIN} ] ; then
+    echo ${BIN} already exists! Skipping build.
+  else
+    cd ${TOP}/${TDIR}
+    ./configure --prefix=${TOP} M4=${TOP}/bin/m4 && make -j ${MAKE_JNUM} && make install
+    if [ "x$?" != "x0" ] ; then
+      echo FAILURE 2
+      exit
+    fi
+  fi
+
+  cd ${TOP}
+  TOOL=autoconf
+  TDIR=${TOOL}-${AUTOCONF_VERSION}
+  FILE=${TDIR}.tar.gz
+  BIN=${TOP}/bin/${TOOL}
+  if [ ! -f ${FILE} ] ; then
+    wget http://ftp.gnu.org/gnu/${TOOL}/${FILE}
+  else
+    echo ${FILE} already exists! Using existing copy.
+  fi
+  if [ ! -d ${TDIR} ] ; then
+    echo Unpacking ${FILE}
+    tar -xzf ${FILE}
+  else
+    echo ${TDIR} already exists! Using existing copy.
+  fi
+  if [ -f ${BIN} ] ; then
+    echo ${BIN} already exists! Skipping build.
+  else
+    cd ${TOP}/${TDIR}
+    ./configure --prefix=${TOP} M4=${TOP}/bin/m4 && make -j ${MAKE_JNUM} && make install
+    if [ "x$?" != "x0" ] ; then
+      echo FAILURE 3
+      exit
+    fi
+  fi
+
+  cd ${TOP}
+  TOOL=automake
+  TDIR=${TOOL}-${AUTOMAKE_VERSION}
+  FILE=${TDIR}.tar.gz
+  BIN=${TOP}/bin/${TOOL}
+  if [ ! -f ${FILE} ] ; then
+    wget http://ftp.gnu.org/gnu/${TOOL}/${FILE}
+  else
+    echo ${FILE} already exists! Using existing copy.
+  fi
+  if [ ! -d ${TDIR} ] ; then
+    echo Unpacking ${FILE}
+    tar -xzf ${FILE}
+    else
+      echo ${TDIR} already exists! Using existing copy.
+    fi
+    if [ -f ${BIN} ] ; then
+      echo ${BIN} already exists! Skipping build.
+    else
+      cd ${TOP}/${TDIR}
+      ./configure --prefix=${TOP} M4=${TOP}/bin/m4 && make -j ${MAKE_JNUM} && make install
+      if [ "x$?" != "x0" ] ; then
+        echo FAILURE 4
+        exit
+      fi
+    fi
+fi
diff --git a/travis/install-mpi.sh b/travis/install-mpi.sh
@@ -37,10 +37,9 @@ case "$os" in
         case "$MPI_IMPL" in
             mpich_shm|mpich_odd)
                 if [ ! -d "$TRAVIS_ROOT/mpich" ]; then
-                    # mpich-v3.3a2 has symbol visibility issue, see https://github.com/pmodels/mpich/issues/2471.
-                    wget --no-check-certificate http://www.mpich.org/static/downloads/nightly/master/mpich/mpich-master-v3.3a2-452-ge0000be3f049.tar.gz
-                    tar -xzf mpich-master-v3.3a2-452-ge0000be3f049.tar.gz
-                    cd mpich-master-v3.3a2-452-ge0000be3f049
+                    wget --no-check-certificate http://www.mpich.org/static/downloads/3.3.2/mpich-3.3.2.tar.gz
+                    tar -xzf mpich-3.3.2.tar.gz
+                    cd mpich-3.3.2
                     mkdir build && cd build
                     ../configure CFLAGS="-w" --prefix=$TRAVIS_ROOT/mpich --disable-fortran --disable-static
                     make -j2
@@ -51,9 +50,9 @@ case "$os" in
                 ;;
             openmpi)
                 if [ ! -d "$TRAVIS_ROOT/open-mpi" ]; then
-                    wget --no-check-certificate https://www.open-mpi.org/software/ompi/v3.0/downloads/openmpi-3.0.0.tar.bz2
-                    tar -xjf openmpi-3.0.0.tar.bz2
-                    cd openmpi-3.0.0
+                    wget --no-check-certificate https://download.open-mpi.org/release/open-mpi/v4.0/openmpi-4.0.2.tar.bz2
+                    tar -xjf openmpi-4.0.2.tar.bz2
+                    cd openmpi-4.0.2
                     mkdir build && cd build
                     ../configure CFLAGS="-w" --prefix=$TRAVIS_ROOT/open-mpi \
                                 --without-verbs --without-fca --without-mxm --without-ucx \