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Updated UKF code with addtional seeding and stopping options #161

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merged 3 commits into from
Jun 21, 2024

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zhangfanmark
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This update includes the use of WM/GM/CSF segmentations derived from the DDSeg method for fiber tracking seeding and stopping.

- Add options to provide WM/GM/CSF segmentation maps (probabilistic map: value 0 to 1). WM map is used for seeding; GM/CSF maps are used for stopping
- Add option to provide a stopping mask (label map)
- Update UI for seeding/stopping options
- Update to handle when different seeding/stopping options are provided
@yrathi yrathi merged commit 2bbff42 into pnlbwh:master Jun 21, 2024
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2 participants