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Protocol CDISC01 final reporting effort repo

This repo contains the study specfic ADaM and TFL code for the CDISC01 protocol final reporting effort.

Directory structure

The programming is created in a typical clinical trial folder structure, where the production (prod) and qc programs have independent directory trees.

Reporting effort level standard code (e.g. SAS macros) should be stored in the share/macros folder.

The global domino.sas autoexec progam is also included in the repository to appropriately set up the SAS environment.

repo
├───Pipelines
├───prod
│   ├───adam
│   └───tfl
├───qc
│   ├───adam
│   │       compare_adam.sas
│   └───tfl
│───share
│   └───macros
│───utilities
│─── domino.sas

Naming convention

The programs follow a typical clinical trial naming convention, where the ADaM programs are named using the dataset name (e.g. ADSL.sas, etc.) and the TFL programs have a t_ prefix to indicate tables, etc.

QC programming and reporting

The QC programming is all in SAS, and there is a compare_adam.sas program which uses SAS PROC COMPARE to create a summary report of all differences between the prod and qc datasets. This program also generates the dominostats.json files which Domino uses to display a dashboard in the jobs screen.

Support

Programming was created by Veramed Ltd. on behalf of Domino Data Lab, Inc.

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  • SAS 73.1%
  • Python 24.0%
  • R 2.8%
  • Shell 0.1%