UAT C1265136917-OB_CLOUD (PACE_OCI_L2_AOP_NRT) #3306
GitHub Actions / Tested with Harmony
failed
Oct 9, 2024 in 0s
2 fail in 1m 28s
Annotations
Check warning on line 0 in tests.verify_collection
github-actions / Tested with Harmony
test_spatial_subset[C1265136917-OB_CLOUD] (tests.verify_collection) failed
test-results/test_report.xml [took 1m 22s]
Raw output
harmony.harmony.ProcessingFailedException: WorkItem failed: podaac/l2ss-py:2.12.0rc1: Error in file '/worker/podaac/subsetter/subset.py', line 563, in function 'compute_time_variable_name': Unable to determine time variable
collection_concept_id = 'C1265136917-OB_CLOUD', env = 'uat'
granule_json = {'meta': {'collection-concept-id': 'C1265136917-OB_CLOUD', 'concept-id': 'G1269180442-OB_CLOUD', 'concept-type': 'gran...024-08-19T04:48:54.000Z'}, 'GranuleUR': 'PACE_OCI_L2_AOP_NRT_PACE_OCI.20240818T153633.L2.OC_AOP.V2_0.NRT.nc_2.0', ...}}
collection_variables = [{'associations': {'collections': [{'concept-id': 'C1265136917-OB_CLOUD'}]}, 'meta': {'association-details': {'collect...scription': 'Extracted from _FillValue metadata attribute', 'Type': 'SCIENCE_FILLVALUE', 'Value': -32767}], ...}}, ...]
harmony_env = <Environment.UAT: 3>
tmp_path = PosixPath('/tmp/pytest-of-runner/pytest-0/test_spatial_subset_C1265136910')
bearer_token = 'eyJ0eXAiOiJKV1QiLCJvcmlnaW4iOiJFYXJ0aGRhdGEgTG9naW4iLCJzaWciOiJlZGxqd3RwdWJrZXlfdWF0IiwiYWxnIjoiUlMyNTYifQ.eyJ0eXBlIj...PeyxnprRPaK3gac91Oz-x86P71av1HLvMkczia1k6hb7eKaicWh-y1jQKv1AVd_CK3UJDRISI73k5dYKXshYKn0sByfae8UmlXqWcdSRsgjA81EWtw59Wg'
skip_spatial = set()
@pytest.mark.timeout(600)
def test_spatial_subset(collection_concept_id, env, granule_json, collection_variables,
harmony_env, tmp_path: pathlib.Path, bearer_token, skip_spatial):
test_spatial_subset.__doc__ = f"Verify spatial subset for {collection_concept_id} in {env}"
if collection_concept_id in skip_spatial:
pytest.skip(f"Known collection to skip for spatial testing {collection_concept_id}")
logging.info("Using granule %s for test", granule_json['meta']['concept-id'])
# Compute a box that is smaller than the granule extent bounding box
north, south, east, west = get_bounding_box(granule_json)
east, west, north, south = create_smaller_bounding_box(east, west, north, south, .95)
start_time = granule_json['umm']["TemporalExtent"]["RangeDateTime"]["BeginningDateTime"]
end_time = granule_json['umm']["TemporalExtent"]["RangeDateTime"]["EndingDateTime"]
# Build harmony request
harmony_client = harmony.Client(env=harmony_env, token=bearer_token)
request_bbox = harmony.BBox(w=west, s=south, e=east, n=north)
request_collection = harmony.Collection(id=collection_concept_id)
harmony_request = harmony.Request(collection=request_collection, spatial=request_bbox,
granule_id=[granule_json['meta']['concept-id']])
logging.info("Sending harmony request %s", harmony_client.request_as_url(harmony_request))
# Submit harmony request and download result
job_id = harmony_client.submit(harmony_request)
logging.info("Submitted harmony job %s", job_id)
> harmony_client.wait_for_processing(job_id, show_progress=True)
verify_collection.py:417:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <harmony.harmony.Client object at 0x7f1dbdcd11b0>
job_id = '2d721b9a-6f0f-4ccc-a4af-f33a566269ac', show_progress = True
def wait_for_processing(self, job_id: str, show_progress: bool = False) -> None:
"""Retrieve a submitted job's completion status in percent.
Args:
job_id: UUID string for the job you wish to interrogate.
Returns:
The job's processing progress as a percentage.
:raises
Exception: This can happen if an invalid job_id is provided or Harmony services
can't be reached.
"""
# How often to refresh the screen for progress updates and animating spinners.
ui_update_interval = 0.33 # in seconds
running_w_errors_logged = False
intervals = round(self.check_interval / ui_update_interval)
if show_progress:
with progressbar.ProgressBar(max_value=100, widgets=progressbar_widgets) as bar:
progress = 0
while progress < 100:
progress, status, message = self.progress(job_id)
if status == 'failed':
> raise ProcessingFailedException(job_id, message)
E harmony.harmony.ProcessingFailedException: WorkItem failed: podaac/l2ss-py:2.12.0rc1: Error in file '/worker/podaac/subsetter/subset.py', line 563, in function 'compute_time_variable_name': Unable to determine time variable
../../../../.cache/pypoetry/virtualenvs/l2ss-py-autotest-iYz8Sff2-py3.10/lib/python3.10/site-packages/harmony/harmony.py:986: ProcessingFailedException
--------------------------------- Captured Log ---------------------------------
INFO root:verify_collection.py:396 Using granule G1269180442-OB_CLOUD for test
INFO root:verify_collection.py:412 Sending harmony request https://harmony.uat.earthdata.nasa.gov/C1265136917-OB_CLOUD/ogc-api-coverages/1.0.0/collections/all/coverage/rangeset?forceAsync=true&subset=lat%28-76.46262125%3A-53.49090875%29&subset=lon%28-58.544141249999996%3A16.941291249999992%29&granuleId=G1269180442-OB_CLOUD
INFO root:verify_collection.py:416 Submitted harmony job 2d721b9a-6f0f-4ccc-a4af-f33a566269ac
Check warning on line 0 in tests.verify_collection
github-actions / Tested with Harmony
test_temporal_subset[C1265136917-OB_CLOUD] (tests.verify_collection) failed
test-results/test_report.xml [took 2s]
Raw output
ValueError: time data '2024-08-18T15:36:33Z' does not match format '%Y-%m-%dT%H:%M:%S.%fZ'
collection_concept_id = 'C1265136917-OB_CLOUD', env = 'uat'
granule_json = {'meta': {'collection-concept-id': 'C1265136917-OB_CLOUD', 'concept-id': 'G1269180442-OB_CLOUD', 'concept-type': 'gran...024-08-19T04:48:54.000Z'}, 'GranuleUR': 'PACE_OCI_L2_AOP_NRT_PACE_OCI.20240818T153633.L2.OC_AOP.V2_0.NRT.nc_2.0', ...}}
collection_variables = [{'associations': {'collections': [{'concept-id': 'C1265136917-OB_CLOUD'}]}, 'meta': {'association-details': {'collect...scription': 'Extracted from _FillValue metadata attribute', 'Type': 'SCIENCE_FILLVALUE', 'Value': -32767}], ...}}, ...]
harmony_env = <Environment.UAT: 3>
tmp_path = PosixPath('/tmp/pytest-of-runner/pytest-0/test_temporal_subset_C126513690')
bearer_token = 'eyJ0eXAiOiJKV1QiLCJvcmlnaW4iOiJFYXJ0aGRhdGEgTG9naW4iLCJzaWciOiJlZGxqd3RwdWJrZXlfdWF0IiwiYWxnIjoiUlMyNTYifQ.eyJ0eXBlIj...PeyxnprRPaK3gac91Oz-x86P71av1HLvMkczia1k6hb7eKaicWh-y1jQKv1AVd_CK3UJDRISI73k5dYKXshYKn0sByfae8UmlXqWcdSRsgjA81EWtw59Wg'
skip_temporal = {'C1238658389-POCLOUD', 'C1238658392-POCLOUD'}
@pytest.mark.timeout(600)
def test_temporal_subset(collection_concept_id, env, granule_json, collection_variables,
harmony_env, tmp_path: pathlib.Path, bearer_token, skip_temporal):
test_spatial_subset.__doc__ = f"Verify temporal subset for {collection_concept_id} in {env}"
if collection_concept_id in skip_temporal:
pytest.skip(f"Known collection to skip for temporal testing {collection_concept_id}")
logging.info("Using granule %s for test", granule_json['meta']['concept-id'])
start_time = granule_json['umm']["TemporalExtent"]["RangeDateTime"]["BeginningDateTime"]
end_time = granule_json['umm']["TemporalExtent"]["RangeDateTime"]["EndingDateTime"]
> temporal_subset = get_half_temporal_extent(start_time, end_time)
verify_collection.py:559:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
verify_collection.py:187: in get_half_temporal_extent
start_dt = datetime.strptime(start, '%Y-%m-%dT%H:%M:%S.%fZ')
/opt/hostedtoolcache/Python/3.10.15/x64/lib/python3.10/_strptime.py:568: in _strptime_datetime
tt, fraction, gmtoff_fraction = _strptime(data_string, format)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
data_string = '2024-08-18T15:36:33Z', format = '%Y-%m-%dT%H:%M:%S.%fZ'
def _strptime(data_string, format="%a %b %d %H:%M:%S %Y"):
"""Return a 2-tuple consisting of a time struct and an int containing
the number of microseconds based on the input string and the
format string."""
for index, arg in enumerate([data_string, format]):
if not isinstance(arg, str):
msg = "strptime() argument {} must be str, not {}"
raise TypeError(msg.format(index, type(arg)))
global _TimeRE_cache, _regex_cache
with _cache_lock:
locale_time = _TimeRE_cache.locale_time
if (_getlang() != locale_time.lang or
time.tzname != locale_time.tzname or
time.daylight != locale_time.daylight):
_TimeRE_cache = TimeRE()
_regex_cache.clear()
locale_time = _TimeRE_cache.locale_time
if len(_regex_cache) > _CACHE_MAX_SIZE:
_regex_cache.clear()
format_regex = _regex_cache.get(format)
if not format_regex:
try:
format_regex = _TimeRE_cache.compile(format)
# KeyError raised when a bad format is found; can be specified as
# \\, in which case it was a stray % but with a space after it
except KeyError as err:
bad_directive = err.args[0]
if bad_directive == "\\":
bad_directive = "%"
del err
raise ValueError("'%s' is a bad directive in format '%s'" %
(bad_directive, format)) from None
# IndexError only occurs when the format string is "%"
except IndexError:
raise ValueError("stray %% in format '%s'" % format) from None
_regex_cache[format] = format_regex
found = format_regex.match(data_string)
if not found:
> raise ValueError("time data %r does not match format %r" %
(data_string, format))
E ValueError: time data '2024-08-18T15:36:33Z' does not match format '%Y-%m-%dT%H:%M:%S.%fZ'
/opt/hostedtoolcache/Python/3.10.15/x64/lib/python3.10/_strptime.py:349: ValueError
--------------------------------- Captured Log ---------------------------------
INFO root:verify_collection.py:555 Using granule G1269180442-OB_CLOUD for test
Loading