Merge pull request #83 from poissonconsulting/cran-prep

Prep for cran submission
poissonconsulting · Jan 7, 2025 · b7b7866 · b7b7866
2 parents a529131 + ba12eea
commit b7b7866
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diff --git a/cran-comments.md b/cran-comments.md
@@ -1,14 +1,10 @@
 ## R CMD check results
 
 0 errors | 0 warnings | 0 notes
-
-## CRAN Issues
-
-After feedback, corrected the noSuggests issue to have all tests, examples, and vignettes run conditionally for packages listed under Suggests.
 
 ## revdepcheck results
 
-We checked 4 reverse dependencies, comparing R CMD check results across CRAN and dev versions of this package.
+We checked 9 reverse dependencies (0 from CRAN + 9 from Bioconductor), comparing R CMD check results across CRAN and dev versions of this package.
 
  * We saw 0 new problems
  * We failed to check 0 packages
diff --git a/inst/WORDLIST b/inst/WORDLIST
@@ -22,10 +22,14 @@ funder
 hms
 ie
 lik
+memoization
+memoize
 modelling
 numericise
+poissontemplate
 skewnorm
 summarise
 surprisal
 testthat
 th
+vectorized
diff --git a/revdep/README.md b/revdep/README.md
@@ -1,24 +1,25 @@
 # Platform
 
-|field    |value                                    |
-|:--------|:----------------------------------------|
-|version  |R version 4.4.1 (2024-06-14)             |
-|os       |macOS Sonoma 14.5                        |
-|system   |aarch64, darwin20                        |
-|ui       |RStudio                                  |
-|language |(EN)                                     |
-|collate  |en_US.UTF-8                              |
-|ctype    |en_US.UTF-8                              |
-|tz       |America/Vancouver                        |
-|date     |2024-08-01                               |
-|rstudio  |2024.04.2+764 Chocolate Cosmos (desktop) |
-|pandoc   |NA                                       |
+|field    |value                                                                                            |
+|:--------|:------------------------------------------------------------------------------------------------|
+|version  |R version 4.4.2 (2024-10-31)                                                                     |
+|os       |macOS Sequoia 15.1                                                                               |
+|system   |aarch64, darwin20                                                                                |
+|ui       |RStudio                                                                                          |
+|language |(EN)                                                                                             |
+|collate  |en_US.UTF-8                                                                                      |
+|ctype    |en_US.UTF-8                                                                                      |
+|tz       |America/Vancouver                                                                                |
+|date     |2025-01-07                                                                                       |
+|rstudio  |2024.12.0+467 Kousa Dogwood (desktop)                                                            |
+|pandoc   |3.2 @ /Applications/RStudio.app/Contents/Resources/app/quarto/bin/tools/aarch64/ (via rmarkdown) |
 
 # Dependencies
 
-|package |old   |new   |Δ  |
-|:-------|:-----|:-----|:--|
-|extras  |0.6.1 |0.7.1 |*  |
+|package |old        |new        |Δ  |
+|:-------|:----------|:----------|:--|
+|extras  |0.7.3.9002 |0.8.0      |*  |
+|chk     |NA         |0.9.2.9004 |*  |
 
 # Revdeps
 
diff --git a/revdep/cran.md b/revdep/cran.md
@@ -1,6 +1,6 @@
 ## revdepcheck results
 
-We checked 4 reverse dependencies, comparing R CMD check results across CRAN and dev versions of this package.
+We checked 9 reverse dependencies (0 from CRAN + 9 from Bioconductor), comparing R CMD check results across CRAN and dev versions of this package.
 
  * We saw 0 new problems
  * We failed to check 0 packages

diff --git a/tests/testthat/test-log-lik.R b/tests/testthat/test-log-lik.R
@@ -172,6 +172,7 @@ test_that("beta_binom known values", {
 })
 
 test_that("beta binomial deviance function is memoized", {
+  skip_if_not_installed("memoise")
   expect_true(memoise::is.memoized(lgamma_size_x))
 })
 
@@ -197,6 +198,7 @@ test_that("lgamma_size_x produces expected outputs", {
 })
 
 test_that("beta_binom memoized function gives same outputs as non-memoized function", {
+  skip_if_not_installed("memoise")
   expect_equal(
     log_lik_beta_binom(1:100, 200, 0.5, 0.1, memoize = FALSE),
     log_lik_beta_binom(1:100, 200, 0.5, 0.1, memoize = TRUE)