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Update issue templates
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@ValWood
ValWood authored Dec 9, 2024
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| Column | Contents | Example | Mandatory? | Multiple entries allowed? |
|----------|---------------------------------------------------------------------------------------------|-----------------------------------------------------------------------------------------|------------|---------------------------|
| 1 (A) | Data type | Transcripts, Chromatin binding, Nucleosome positioning, Poly(A) sites, Replication origins | Yes | No |
| 2 (B) | Track label | See below for format and examples*** | Yes | No |
| 3 (C) | Assayed gene product | Fkh2 | No (only for chromatin binding data) | No |
| 4 (D) | Strain background | h- cdc25-22, leu1-1 | Yes | Yes |
| 5 (E) | WT or mutant (strains with only background mutations are considered WT) | WT | Yes | No |
| 6 (F) | Mutant alleles | clr4delta, dfp1-3A | No | Yes |
| 7 (G) | Conditions | YES, high temperature; glucose MM, standard temperature + HU | No | No |
| 8 (H) | Comment | Free-text field for additional information | No | Yes |
| 9 (I) | Growth phase or response | Vegetative growth, meiosis, quiescence, glucose starvation, oxidative stress, heat shock | Yes | Yes (if the track combines data) |
| 10 (J) | Strand | Forward, reverse | No | No |
| 11 (K) | Assay type | Tiling microarray, RNA-seq, HT sequencing | Yes | No |
| 12 (L) | First author (surname) | Soriano | Yes | No |
| 13 (M) | Publication year | 2020 | Yes | No |
| 14 (N) | PubMed ID | 31077324 | Yes | No |
| 15 (O) | Database | GEO, ArrayExpress | No (required for data in public repositories) | No |
| 16 (P) | Study ID | GSE110976, PRJEB7403 | No (required if Database has an entry) | No |
| 17 (Q) | Sample ID | GSM3019628, ERS555567 | No | Yes |
| 18 (R) | Data file type | bigwig, bed | Yes | No |
| 19 (S) | File name | Name given to submitted data file relevant to the track | Yes | No |
| Column | Contents | | Example | Mandatory? | Multiple entries allowed? |
|----------|---------------------------------------------------------------------------------------------|-----------|-----------------------------------------------------------------------------------------|------------|---------------------------|
| 1 (A) | Data type | | Transcripts, Chromatin binding, Nucleosome positioning, Poly(A) sites, Replication origins | Yes | No |
| 2 (B) | Track label | | See below for format and examples*** | Yes | No |
| 3 (C) | Assayed gene product | | Fkh2 | No (only for chromatin binding data) | No |
| 4 (D) | Strain background | | h- cdc25-22, leu1-1 | Yes | Yes |
| 5 (E) | WT or mutant (strains with only background mutations are considered WT) | | WT | Yes | No |
| 6 (F) | Mutant alleles | | clr4delta, dfp1-3A | No | Yes |
| 7 (G) | Conditions | | YES, high temperature; glucose MM, standard temperature + HU | No | No |
| 8 (H) | Comment | | Free-text field for additional information | No | Yes |
| 9 (I) | Growth phase or response | | Vegetative growth, meiosis, quiescence, glucose starvation, oxidative stress, heat shock | Yes | Yes (if the track combines data) |
| 10 (J) | Strand | | Forward, reverse | No | No |
| 11 (K) | Assay type | | Tiling microarray, RNA-seq, HT sequencing | Yes | No |
| 12 (L) | First author (surname) | | Soriano | Yes | No |
| 13 (M) | Publication year | | 2020 | Yes | No |
| 14 (N) | PubMed ID | | 31077324 | Yes | No |
| 15 (O) | Database | | GEO, ArrayExpress | No (required for data in public repositories) | No |
| 16 (P) | Study ID | | GSE110976, PRJEB7403 | No (required if Database has an entry) | No |
| 17 (Q) | Sample ID | | GSM3019628, ERS555567 | No | Yes |
| 18 (R) | Data file type | | bigwig, bed | Yes | No |
| 19 (S) | File name | | Name given to submitted data file relevant to the track | Yes | No |

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