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### RNA gene coordinate changes | ||
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The table below contains all changes to sequence coordinates in RNA genes. Each pair of rows corresponds to a change, with columns corresponding to: | ||
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* **Date:** date of the change. | ||
* **Systematic id:** systematic id of the gene affected. | ||
* **Primary name:** primary name of the gene affected, if it exists. | ||
* **Before / after change:** if the value is `before`, the value of `Coordinates` corresponds to coordinates of the CDS before the change. If the value is `after`, the value of `Coordinates` corresponds to coordinates of the CDS after the change. | ||
* **Coordinates:** see above. | ||
* **Comment:** a comment by PomBase curators might be associated with a change. | ||
* **Reference:** a reference (e.g. a PubMed ID) might be associated with a change. | ||
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For a list of all changes in the genome (including protein coding genes) in a similar format see: | ||
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* [https://github.com/pombase/genome_changelog/blob/master/results/all_coordinate_changes_file_comments_no_type_change.tsv](https://github.com/pombase/genome_changelog/blob/master/results/all_coordinate_changes_file_comments_no_type_change.tsv) for changes after 23-08-2011. | ||
* [https://github.com/pombase/genome_changelog/blob/master/results/pre_svn_coordinate_changes_file_comments_no_type_change.tsv](https://github.com/pombase/genome_changelog/blob/master/results/pre_svn_coordinate_changes_file_comments_no_type_change.tsv) for previous changes. | ||
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%%table file=gene-coordinate-change-data-RNA.tsv |
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src/docs/status/gene-coordinate-changes-protein-coding.PomBase.md
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### Protein coding gene coordinate changes | ||
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The table below contains all changes to coding sequence (CDS) coordinates in protein coding genes. Each pair of rows corresponds to a change, with columns corresponding to: | ||
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* **Date:** date of the change. | ||
* **Systematic id:** systematic id of the gene affected. | ||
* **Primary name:** primary name of the gene affected, if it exists. | ||
* **Before / after change:** if the value is `before`, the value of `Coordinates` corresponds to coordinates of the CDS before the change. If the value is `after`, the value of `Coordinates` corresponds to coordinates of the CDS after the change. | ||
* **Coordinates:** see above. | ||
* **Comment:** a comment by PomBase curators might be associated with a change. | ||
* **Reference:** a reference (e.g. a PubMed ID) might be associated with a change. | ||
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For a list of all changes in the genome (including UTRs of coding genes and RNA genes) in a similar format see: | ||
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* [https://github.com/pombase/genome_changelog/blob/master/results/all_coordinate_changes_file_comments_no_type_change.tsv](https://github.com/pombase/genome_changelog/blob/master/results/all_coordinate_changes_file_comments_no_type_change.tsv) for changes after 23-08-2011. | ||
* [https://github.com/pombase/genome_changelog/blob/master/results/pre_svn_coordinate_changes_file_comments_no_type_change.tsv](https://github.com/pombase/genome_changelog/blob/master/results/pre_svn_coordinate_changes_file_comments_no_type_change.tsv) for previous changes. | ||
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%%table file=gene-coordinate-change-data-protein-coding.tsv |