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add .ssf for many packages #114

Merged
merged 57 commits into from
May 9, 2023
Merged

add .ssf for many packages #114

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d4fc37d
zinitial commit
93Boy Jan 12, 2023
8beb742
upto 2021_Kilinc_northeastAsia
93Boy Feb 16, 2023
a063d6a
2021 data
93Boy Feb 17, 2023
9d385e5
2021 data
93Boy Feb 17, 2023
f560d48
2020 publications)
93Boy Feb 21, 2023
92cb178
upto 2020
93Boy Feb 21, 2023
aa652d2
checksums added for all available ena files
93Boy Mar 21, 2023
97a1835
2019
93Boy Mar 23, 2023
ae2302e
AgrantTamir2020
93Boy Mar 24, 2023
49a2880
2019completed
93Boy Mar 24, 2023
28eaccc
UDG&library info
93Boy Mar 31, 2023
538f11e
UDG&Library info
93Boy Mar 31, 2023
c19caff
renamed .tsv to .ssf modified checksums
93Boy Apr 4, 2023
46cac6d
a minor fix of unnecessary char
93Boy Apr 12, 2023
f02e4f5
.py files and double quotes removal
93Boy Apr 16, 2023
ffd3243
made all headers lowercase
93Boy Apr 16, 2023
b5596c0
Update SSF for 2021_CarlhoffNature and 2021_PattersonNature
TCLamnidis Apr 17, 2023
99408ff
mentioned schema changes
93Boy Apr 20, 2023
1128c69
mentioned changes
93Boy Apr 20, 2023
98808ab
empty lines removed in poseidon.yml files
93Boy Apr 20, 2023
7f76d65
Merge branch 'master' into ENA_Data
nevrome Apr 28, 2023
6025ab3
resolved Carlhoff merge conflict
nevrome Apr 28, 2023
d5e8a3a
fixed one file as far as currently possible
nevrome Apr 28, 2023
b270b46
fixed poseidon IDs
nevrome May 2, 2023
49aa7ef
[2021_Wang_EastAsia] fixed wrong entries in udg and strandedness colu…
nevrome May 2, 2023
0cc3f6f
[2019_GonzalesFortes_Iberia] wrong n/a value
nevrome May 2, 2023
048b243
removed all instances of wrong n/a value N/A#
nevrome May 2, 2023
d88da16
[2021_CarlhoffNature] fixed failing .janno and .ssf comparison caused…
nevrome May 2, 2023
79dfb77
removed 'mixed' values from .ssf files, where they can not exist
nevrome May 2, 2023
1c0160a
[2021_PattersonNature] fixed merge conflict and removed superfluous q…
nevrome May 2, 2023
30fc2ab
[2019_Saag_EasternBaltic] fixed switched columns udg and library_built
nevrome May 2, 2023
ba45f9e
[2019_Sikora_NorthEastSiberia] same issue + missing .SG in poseidon IDs
nevrome May 2, 2023
a42c8a8
[2019_Nikitin_LBK] removed 'mixed' entries not caught previously, bec…
nevrome May 3, 2023
30da77c
[2021_Papac_CentralEurope] fixed mismatch in library_built infor
nevrome May 3, 2023
cf24df6
[2020_Nakatsuka_Andes] fixed various wrong entries in the .ssf file c…
nevrome May 3, 2023
eac589a
[2019_SanchezQuinto_Megalithic] fixed strandedness for one individual
nevrome May 3, 2023
1c4e128
[2020_Yu_NorthRussia] adjusted udg treatment and strandedness for UKY…
nevrome May 3, 2023
ebf1841
[2020_Fernandes_westernMediterranean] fixed wrong strandedness - with…
nevrome May 3, 2023
18ff5b3
[2021_GnecchiRuscone_KazakhSteppe] wrong entry in poseidon_IDs
nevrome May 3, 2023
a2e7dcb
[2020_Rivollat_FranceGermany] fixed poseidon_IDs
nevrome May 3, 2023
dc91ad6
[2019_Villalba_Iberia] fixed poseidon_IDs
nevrome May 3, 2023
25eab04
[2021_Wang_EastAsia] fixed poseidon_IDs
nevrome May 3, 2023
eba98aa
[2020_Ning_China] fixed poseidon_IDs
nevrome May 3, 2023
ca05b5a
[2019_Nikitin_LBK] fixed poseidon_IDs
nevrome May 3, 2023
fb631ab
[2020_Stoneking_Pacific] fixed poseidon_IDs
nevrome May 3, 2023
0d2bc22
[2019_Wang_Caucasus] fixed poseidon_IDs
nevrome May 3, 2023
f087b08
[2021_PattersonNature] fixed poseidon_IDs
nevrome May 3, 2023
b1a80c3
[2021_Yaka_Anatolia] reverted the changes - there is an extra PR for …
nevrome May 5, 2023
58faa58
also removed newline
nevrome May 5, 2023
9056132
[2019_BraceNatureEcology] moved to an own PR
nevrome May 5, 2023
4173056
[2020_Bergstrom_HGDP] moved to an own PR
nevrome May 5, 2023
d71bc0a
[2019_Haber_Crusaders] moved to an own PR
nevrome May 5, 2023
c7f5dc4
[2019_Jeong_InnerEurasia] moved to an own PR
nevrome May 5, 2023
3381141
[2019_Brace_Britain] moved to an own PR
nevrome May 5, 2023
8c73d28
removing some quotes and wrong CHANGELOG entries
nevrome May 5, 2023
3952d7f
ran trident update to update all package affected versions
nevrome May 5, 2023
b65a71b
Merge pull request #123 from poseidon-framework/massiveVersionBump
nevrome May 7, 2023
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1 change: 1 addition & 0 deletions 2018_VeeramahPNAS/CHANGELOG.md
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81 changes: 81 additions & 0 deletions 2018_VeeramahPNAS/ENAtable.ssf
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8 changes: 5 additions & 3 deletions 2018_VeeramahPNAS/POSEIDON.yml
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1 change: 1 addition & 0 deletions 2019_Antonio_AncientRome/CHANGELOG.md
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135 changes: 135 additions & 0 deletions 2019_Antonio_AncientRome/ENAtable.ssf
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8 changes: 5 additions & 3 deletions 2019_Antonio_AncientRome/POSEIDON.yml
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1 change: 1 addition & 0 deletions 2019_Feldman_Anatolia/CHANGELOG.md
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9 changes: 9 additions & 0 deletions 2019_Feldman_Anatolia/ENAtable.ssf
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8 changes: 5 additions & 3 deletions 2019_Feldman_Anatolia/POSEIDON.yml
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1 change: 1 addition & 0 deletions 2019_Feldman_Philistines/CHANGELOG.md
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11 changes: 11 additions & 0 deletions 2019_Feldman_Philistines/ENAtable.ssf
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8 changes: 5 additions & 3 deletions 2019_Feldman_Philistines/POSEIDON.yml
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1 change: 1 addition & 0 deletions 2019_Flegontov_PalaeoEskimo/CHANGELOG.md
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