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Create 2022_Changmai_Cambodia.janno #196

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@scarlhoff scarlhoff commented Aug 15, 2024

.janno file for future use.

Changmai et al. Sci Rep Ancient DNA from Protohistoric Period Cambodia indicates that South Asians admixed with local populations as early as 1st–3rd centuries CE 2022 https://www.nature.com/articles/s41598-022-26799-3

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Thanks a lot @scarlhoff. We'll take a look!

@nevrome nevrome self-assigned this Sep 13, 2024
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nevrome commented Sep 13, 2024

Thanks for preparing this .janno file! I see no issues.

Maybe you could remove all columns that are completely empty/filled only with n/a, but beyond that it's all good, I think.

@stschiff stschiff added the only .janno This PR does not feature a full package, but only a .janno file label Oct 9, 2024
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stschiff commented Dec 3, 2024

@TCLamnidis will reach out to Piya to ask him for the genotype data... unless it's by David's lab, in which case we can copy from AADR.

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Piya confirmed via email that the exact genotypes should be available on the AADR, and also noted that data for the same individual have been previously published as part of Lipson et al. 2018. This paper adds sequencing data from 2 libraries to increase coverage.

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OK we discussed yesterday that we will pull in the Genotype data from the AADR in this case, as the data was in fact generated in the Reich lab. Any volunteers to do this?

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4 participants