added new package named 2023_Skourtanioti_Aegean #201
Closed
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
PR Checklist for a new package submission
POSEIDON.yml
conforms to the general title structure suggested here:<Year>_<Last name of first author>_<Region, time period or special feature of the paper>
, e.g.2021_Zegarac_SoutheasternEurope
,2021_SeguinOrlando_BellBeaker
or2021_Kivisild_MedievalEstonia
.POSEIDON.yml
file with not just the file-referencing fields, but also the following meta-information fields present and filled:poseidonVersion
,title
,description
,contributor
,packageVersion
,lastModified
(see here for their definition).janno
file (for a list of available fields look here and here for more detailed documentation about them)..bib
file with the necessary literature references for each sample in the.janno
file.POSEIDON.yml
file and there are no additional, supplementary files in the submission that are not documented there..janno
and.bib
file are all named after the package title and only differ in the file extension.POSEIDON.yml
file is1.0.0
.poseidonVersion
of the package in thePOSEIDON.yml
file is set to the latest version of the Poseidon schema.POSEIDON.yml
file contains the corresponding checksums for the fieldsgenoFile
,snpFile
,indFile
,jannoFile
andbibFile
.CHANGELOG
file or one with a single entry for version1.0.0
.Publication
column in the.janno
file is filled and the respective.bib
file has complete entries for the listed mentioned keys..janno
file does not include any empty columns or columns only filled withn/a
..janno
file adheres to the standard order as defined in the Poseidon schema here..janno
and the.ssf
files are not fully quoted, so they only use single- or double quotes ("..."
,'...'
) to enclose text fields where it is strictly necessary (i.e. their entry includes a TAB).trident validate --fullGeno
.git lfs migrate import --no-rewrite path/to/file.bed
(see here).