train_classifiers.sh
- Script that trains the classifiers for BGC activity prediction (antibacterial, antifungal, etc.)predict_function.sh
- Script that predict the activity of BGCs for a given genomemultiple_predict_function.py
- Script that runs antismash and rgi and predicts the activity of a list of genomes
Example command to run the workflow
python multiple_predict_function.py path/genome1 path/genome2 --output_dir outputs --no_SSN True