Skip to content

Issues: prody/ProDy

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

81 Open 637 Closed
81 Open 637 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Import error with numpy 2
#2053 opened Mar 5, 2025 by MigueLugo
4
Multi-line data in PDBx/mmCIF and ModelCIF files
#2052 opened Feb 28, 2025 by aozalevsky
1
ProDy - Ran OK in --env when I gor version set
#2051 opened Feb 26, 2025 by dlbeveridge
2
Problem GNM DEmo: AttributeError: 'C KDTree' object has no attribute 'neighbor_get_count'
#2049 opened Feb 23, 2025 by dlbeveridge
5
KeyError: 'B_iso_or_equiv'
#2045 opened Feb 13, 2025 by frgoe003
1
8
NMA graphics problem in Markdown
#2039 opened Feb 12, 2025 by dlbeveridge
3
showMatrix Graphics not working right
#2038 opened Feb 10, 2025 by dlbeveridge
1
@jamesmkrieger
5
Download problem on MacOS
#2036 opened Feb 9, 2025 by dlbeveridge
1
Support for Python 3.13
#2034 opened Feb 4, 2025 by gitozi
1
How to obtain the full Kirchhoff matrix in GNM Prody - protein
#2032 opened Feb 1, 2025 by german12341212
1
Error assessing Drugability in DruGui
#2030 opened Jan 27, 2025 by MigueLugo
Pdbfixer in Clustenm
#2028 opened Jan 20, 2025 by vvishwesh
rmsd and norm should be documented in showProjection
#2025 opened Jan 15, 2025 by yasirkhanqu
PCA buildCovariance and app do not superpose well for projections
#2024 opened Jan 15, 2025 by yasirkhanqu
1
writePDB truncates 4 letters residues to 3 letters
#2023 opened Jan 6, 2025 by Cventura18
2
How to select minus (-) residue number
#2021 opened Dec 25, 2024 by locitran
1
Problems reading .msaio on Mac M2
#2019 opened Dec 18, 2024 by karenjgonzalez
3
Potential issue with conda package.
#2005 opened Nov 28, 2024 by vincrichard
4
Running InsTy in Parallel
#2002 opened Nov 23, 2024 by groponp
4
Error when import Insty
#2001 opened Nov 23, 2024 by groponp
2
Waters bridging between chains Feature request Adding a feature that does not yet exist.
#1987 opened Nov 7, 2024 by jamesmkrieger
1
Chain ID in parseMMCIF is corresponding to asym_id or auth_asym_id
#1985 opened Nov 4, 2024 by hnguyentt
1
Problem with calcADPAxes
#1975 opened Oct 15, 2024 by karolamik13
2
update clustenm for openmm 8
#1971 opened Oct 9, 2024 by jamesmkrieger
new cif fields (Annotation of Protein Modifications in the PDB)
#1970 opened Oct 9, 2024 by jamesmkrieger
ProTip! Type g i on any issue or pull request to go back to the issue listing page.