Return edges in phenotype prediction

Signed-off-by: Liang Zhang <[email protected]>
psychelzh · Feb 29, 2024 · 7f61d32 · 7f61d32
1 parent 3123f41
commit 7f61d32
Showing 1 changed file with 2 additions and 1 deletion.
diff --git a/_scripts/predict_phenotypes.R b/_scripts/predict_phenotypes.R
@@ -25,7 +25,8 @@ cpm_branches <- tarchetypes::tar_map(
       confounds = match_confounds(users_confounds, fd),
       bias_correct = FALSE,
       thresh_method = thresh_method,
-      thresh_level = thresh_level
+      thresh_level = thresh_level,
+      return_edges = "sum"
     ),
     retrieval = "worker",
     storage = "worker"