Adding github handle for each contact; See OBOFoundry#725

ptgolden · Sep 14, 2018 · d0b5eb8 · d0b5eb8
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diff --git a/ontology/aro.md b/ontology/aro.md
@@ -4,6 +4,7 @@ id: aro
 contact:
   email: [email protected]
   label: CARD
+  github: raphenya
 description: Antibiotic resistance genes and mutations
 homepage: https://github.com/arpcard/aro
 license:

diff --git a/ontology/bcgo.md b/ontology/bcgo.md
@@ -8,6 +8,7 @@ homepage: https://github.com/obi-bcgo/bcgo
 contact:
   email: [email protected]
   label: Jie Zheng
+  github: zhengj2007
 products:
   - id: bcgo.owl
 tracker: https://github.com/obi-bcgo/bcgo/issues

diff --git a/ontology/bco.md b/ontology/bco.md
@@ -5,6 +5,7 @@ in_foundry: false
 contact:
   email: [email protected]
   label: Ramona Walls
+  github: ramonawalls
 license:
   url: https://creativecommons.org/publicdomain/zero/1.0/
   label: CC-BY 1.0

diff --git a/ontology/bfo.md b/ontology/bfo.md
@@ -5,6 +5,7 @@ in_foundry_order: 1
 contact:
   email: [email protected]
   label: Barry Smith
+  github: phismith
 description: The upper level ontology upon which OBO Foundry ontologies are built.
 domain: upper
 homepage: http://ifomis.org/bfo/

diff --git a/ontology/bspo.md b/ontology/bspo.md
@@ -4,6 +4,7 @@ id: bspo
 contact:
   email: [email protected]
   label: Chris Mungall
+  github: cmungall
 description: An ontology for respresenting spatial concepts, anatomical axes, gradients, regions, planes, sides, and surfaces
 domain: anatomy
 homepage: https://github.com/obophenotype/biological-spatial-ontology

diff --git a/ontology/caro.md b/ontology/caro.md
@@ -4,6 +4,7 @@ id: caro
 contact:
   email: [email protected]
   label: Melissa Haendel
+  github: mellybelly
 license:
   url: https://creativecommons.org/licenses/by/3.0/
   label: CC-BY 3.0

diff --git a/ontology/ceph.md b/ontology/ceph.md
@@ -10,6 +10,7 @@ build:
 contact:
   email: [email protected]
   label: Chris Mungall
+  github: cmungall
 description: An anatomical and developmental ontology for cephalopods
 domain: anatomy
 homepage: https://github.com/obophenotype/cephalopod-ontology

diff --git a/ontology/chebi.md b/ontology/chebi.md
@@ -13,6 +13,7 @@ twitter: chebit
 contact:
   email: [email protected]
   label: Gareth Owen
+  github: "G-Owen"
 license:
   url: https://creativecommons.org/licenses/by/4.0/
   label: CC-BY 4.0

diff --git a/ontology/chmo.md b/ontology/chmo.md
@@ -7,6 +7,7 @@ license:
 contact:
   email: [email protected]
   label: Colin Batchelor
+  github: batchelorc
 mailing_list: "[email protected]"
 description: CHMO, the chemical methods ontology, describes methods used to
 domain: health

diff --git a/ontology/cio.md b/ontology/cio.md
@@ -4,6 +4,7 @@ id: cio
 contact: 
   email: [email protected]
   label: Frederic Bastian
+  github: fbastian
 license:
   url: https://www.gnu.org/licenses/gpl-3.0.en.html
   label: GNU GPL 3.0

diff --git a/ontology/cl.md b/ontology/cl.md
@@ -18,6 +18,7 @@ integration_server: http://build.berkeleybop.org/job/build-cl/
 contact:
   label: Alexander Diehl
   email: [email protected]
+  github: addiehl
 license:
   url: http://creativecommons.org/licenses/by/3.0/
   label: CC-BY

diff --git a/ontology/cro.md b/ontology/cro.md
@@ -12,6 +12,7 @@ contact:
 license:
   url: https://creativecommons.org/licenses/by/2.0/
   label: CC-BY
+  github: marijane
 build:
   checkout: git clone https://github.com/openrif/contributor-role-ontology.git
   system: git

diff --git a/ontology/cteno.md b/ontology/cteno.md
@@ -13,6 +13,7 @@ build:
 contact:
   email: [email protected]
   label: Chris Mungall
+  github: cmungall
 description: An anatomical and developmental ontology for ctenophores (Comb Jellies)
 domain: anatomy
 homepage: https://github.com/obophenotype/ctenophore-ontology

diff --git a/ontology/ddanat.md b/ontology/ddanat.md
@@ -4,6 +4,7 @@ id: ddanat
 contact:
   email: [email protected]
   label: Petra Fey
+  github: pfey03
 description: A structured controlled vocabulary of the anatomy of the slime-mold Dictyostelium discoideum
 domain: anatomy
 homepage: http://dictybase.org/

diff --git a/ontology/ddpheno.md b/ontology/ddpheno.md
@@ -4,6 +4,7 @@ id: ddpheno
 contact:
   email: [email protected]
   label: Petra Fey
+  github: pfey03
 license:
   url: http://creativecommons.org/publicdomain/zero/1.0/
   label: CC-0

diff --git a/ontology/dideo.md b/ontology/dideo.md
@@ -6,6 +6,7 @@ description: The Potential Drug-drug Interaction and Potential Drug-drug Interac
 contact:
   email: [email protected]
   label: Mathias Brochhausen
+  github: mbrochhausen
 license:
   url: https://creativecommons.org/licenses/by/4.0/
   label: CC-BY 4.0

diff --git a/ontology/doid.md b/ontology/doid.md
@@ -5,6 +5,7 @@ in_foundry_order: 1
 contact:
   email: [email protected]
   label: Lynn Schriml
+  github: lschriml
 description: An ontology for describing the classification of human diseases organized by etiology.
 twitter: diseaseontology
 facebook: https://www.facebook.com/diseaseontology

diff --git a/ontology/duo.md b/ontology/duo.md
@@ -12,6 +12,7 @@ build:
 contact:
   email: [email protected]
   label: Melanie Courtot
+  github: mcourtot
 description: DUO is an ontology which represent data use conditions.
 homepage: https://github.com/EBISPOT/DUO
 products:

diff --git a/ontology/eco.md b/ontology/eco.md
@@ -23,6 +23,7 @@ build:
 contact:
   email: [email protected]
   label: Michelle Giglio 
+  github: mgiglio99
 publications:
   - id: http://www.ncbi.nlm.nih.gov/pubmed/25052702
     title: "Standardized description of scientific evidence using the Evidence Ontology (ECO)"

diff --git a/ontology/ecocore.md b/ontology/ecocore.md
@@ -12,6 +12,7 @@ build:
 contact:
   email: [email protected] 
   label: Pier Luigi Buttigieg
+  github: pbuttigieg
 description: An ontology to provide core semantics for ecological entities.
 domain: ecological functions, ecological interactions
 homepage: https://github.com/EcologicalSemantics/ecocore

diff --git a/ontology/emap.md b/ontology/emap.md
@@ -4,6 +4,7 @@ id: emap
 contact:
   email: [email protected]
   label: Terry Hayamizu
+  github: tfhayamizu
 description: A structured controlled vocabulary of stage-specific anatomical structures of the mouse (Mus).
 domain: anatomy
 homepage: http://emouseatlas.org

diff --git a/ontology/emapa.md b/ontology/emapa.md
@@ -4,6 +4,7 @@ id: emapa
 contact:
   email: [email protected]
   label: Terry Hayamizu
+  github: tfhayamizu
 license:
   url: https://creativecommons.org/licenses/by/4.0/
   label: CC-BY 4.0

diff --git a/ontology/envo.md b/ontology/envo.md
@@ -4,6 +4,7 @@ id: envo
 contact:
   email: [email protected]
   label: Pier Luigi Buttigieg
+  github: pbuttigieg
 description: Ontology of environmental features and habitats
 domain: environment
 homepage: http://environmentontology.org/

diff --git a/ontology/eupath.md b/ontology/eupath.md
@@ -4,6 +4,7 @@ id: eupath
 contact:
   email: [email protected]
   label: Chris Stoeckert
+  github: cstoeckert
 license:
   url: http://creativecommons.org/licenses/by/4.0/
   label: CC-BY

diff --git a/ontology/fao.md b/ontology/fao.md
@@ -4,6 +4,7 @@ id: fao
 contact:
   email: [email protected]
   label: Midori Harris
+  github: mah11
 description: A structured controlled vocabulary for the anatomy of fungi.
 domain: anatomy
 tracker: https://github.com/obophenotype/fungal-anatomy-ontology/issues

diff --git a/ontology/flopo.md b/ontology/flopo.md
@@ -4,6 +4,7 @@ id: flopo
 contact:
   email: [email protected]
   label: Robert Hoehndorf
+  github: leechuck
 description: Traits and phenotypes of flowering plants occurring in digitized Floras
 domain: phenotype
 homepage: https://github.com/flora-phenotype-ontology/flopoontology

diff --git a/ontology/foodon.md b/ontology/foodon.md
@@ -4,6 +4,7 @@ id: foodon
 contact:
   email: [email protected]
   label: Damion Dooley
+  github: Public-Health-Bioinformatics
 description: A broadly scoped ontology representing entities which bear a “food role”.  It encompasses materials in natural ecosystems and food webs as well as human-centric categorization and handling of food.
 domain: food
 homepage: http://foodontology.github.io/foodon/

diff --git a/ontology/fypo.md b/ontology/fypo.md
@@ -9,6 +9,7 @@ build:
 contact:
   email: [email protected]
   label: Midori Harris
+  github: mah11
 description: FYPO is a formal ontology of phenotypes observed in fission yeast.
 domain: phenotype
 homepage: https://github.com/pombase/fypo

diff --git a/ontology/gaz.md b/ontology/gaz.md
@@ -4,6 +4,7 @@ id: gaz
 contact:
   email: [email protected]
   label: Lynn Schriml
+  github: lschriml
 homepage: http://gensc.org/gc_wiki/index.php/GAZ_Project
 description: A gazetteer constructed on ontological principles
 products:

diff --git a/ontology/geno.md b/ontology/geno.md
@@ -9,6 +9,7 @@ tracker: https://github.com/monarch-initiative/GENO-ontology/issues
 contact:
   email: [email protected]
   label: Matthew Brush
+  github: mbrush
 license:
   url: https://creativecommons.org/licenses/by-sa/2.0/
   label: CC-BY-SA

diff --git a/ontology/go.md b/ontology/go.md
@@ -2,6 +2,10 @@
 layout: ontology_detail
 id: go
 in_foundry_order: 1
+contact:
+  email: [email protected]
+  label: David Hill
+  github: ukemi
 label: GO
 description: An ontology for describing the function of genes and gene products
 title: Gene Ontology

diff --git a/ontology/hom.md b/ontology/hom.md
@@ -3,7 +3,8 @@ layout: ontology_detail
 id: hom
 contact:
   email: [email protected]
-  label: 'BgeeDB'
+  label: Frederic Bastian
+  github: fbastian
 description: This ontology represents concepts related to homology, as well as other concepts used to describe similarity and non-homology.
 homepage: https://github.com/BgeeDB/homology-ontology
 products:

diff --git a/ontology/hp.md b/ontology/hp.md
@@ -9,6 +9,7 @@ homepage: http://www.human-phenotype-ontology.org/
 contact:
   email: [email protected]
   label: Sebastian Koehler
+  github: drseb
 products:
   - id: hp.owl
   - id: hp.obo

diff --git a/ontology/iao.md b/ontology/iao.md
@@ -4,6 +4,7 @@ id: iao
 contact:
   email: [email protected]
   label: Jie Zheng
+  github: zhengj2007
 description: "An ontology of information entities."
 domain: information
 homepage: https://github.com/information-artifact-ontology/IAO/

diff --git a/ontology/ico.md b/ontology/ico.md
@@ -9,6 +9,7 @@ license:
 contact:
   email: Yongqun Oliver He
   label: [email protected]
+  github: yongqunh
 homepage: https://github.com/ICO-ontology/ICO
 tracker: https://github.com/ICO-ontology/ICO/issues 
 products:

diff --git a/ontology/ido.md b/ontology/ido.md
@@ -4,6 +4,7 @@ id: ido
 contact:
   email: [email protected]
   label: Lindsay Cowell
+  github: lgcowell
 license:
   url: https://creativecommons.org/licenses/by/3.0/
   label: CC-BY 3.0 

diff --git a/ontology/ma.md b/ontology/ma.md
@@ -4,6 +4,7 @@ id: ma
 contact:
   email: [email protected]
   label: Terry Hayamizu
+  github: tfhayamizu
 license:
   url: https://creativecommons.org/licenses/by/4.0/
   label: CC-BY 4.0

diff --git a/ontology/mf.md b/ontology/mf.md
@@ -4,6 +4,7 @@ id: mf
 contact:
   email: [email protected]
   label: Janna Hastings
+  github: jannahastings
 description: The Mental Functioning Ontology is an overarching ontology for all aspects of mental functioning.
 domain: health
 homepage: https://github.com/jannahastings/mental-functioning-ontology

diff --git a/ontology/mfmo.md b/ontology/mfmo.md
@@ -16,6 +16,7 @@ tracker: https://github.com/RDruzinsky/feedontology/issues
 contact:
   email: [email protected]
   label: Robert Druzinsky
+  github: RDruzinsky
 dependencies:
  - id: uberon
 products:

diff --git a/ontology/mfoem.md b/ontology/mfoem.md
@@ -4,6 +4,7 @@ id: mfoem
 contact:
   email: [email protected]
   label: Janna Hastings
+  github: jannahastings
 description: An ontology of affective phenomena such as emotions, moods, appraisals and subjective feelings.
 domain: health
 homepage: https://github.com/jannahastings/emotion-ontology

diff --git a/ontology/miapa.md b/ontology/miapa.md
@@ -4,6 +4,7 @@ id: miapa
 contact:
   email: [email protected]
   label: Hilmar Lapp
+  github: hlapp
 description: An application ontology to formalize annotation of phylogenetic data.
 homepage: http://www.evoio.org/wiki/MIAPA
 products:

diff --git a/ontology/mondo.md b/ontology/mondo.md
@@ -11,6 +11,7 @@ license:
 contact:
   email: [email protected]
   label: Nicole Vasilevsky
+  github: nicolevasilevsky
 taxon:
   id: NCBITaxon:33208
   label: Metazoa

diff --git a/ontology/mpio.md b/ontology/mpio.md
@@ -5,6 +5,7 @@ title: Minimum PDDI Information Ontology
 contact:
   email: [email protected]
   label: Mathias Brochhausen
+  github: mbrochhausen
 description: An ontology of minimum information regarding potential drug-drug interaction information.
 domain: health
 homepage: https://github.com/MPIO-Developers/MPIO

diff --git a/ontology/mro.md b/ontology/mro.md
@@ -8,6 +8,7 @@ homepage:  https://github.com/IEDB/MRO
 contact:
   label: Bjoern Peters
   email: [email protected]
+  github: bpeters42
 license:
   url: https://creativecommons.org/licenses/by/3.0/
   label: CC-BY

diff --git a/ontology/nbo.md b/ontology/nbo.md
@@ -4,6 +4,7 @@ id: nbo
 contact:
   email: [email protected] 
   label: George Gkoutos
+  github: gkoutos
 description: An ontology of human and animal behaviours and behavioural phenotypes
 domain: behavior
 homepage: https://github.com/obo-behavior/behavior-ontology/

diff --git a/ontology/ncit.md b/ontology/ncit.md
@@ -5,6 +5,7 @@ title: NCI Thesaurus OBO Edition
 contact:
   email: [email protected]
   label: Melissa Haendel
+  contact: mellybelly
 license:
   url: https://creativecommons.org/licenses/by/3.0/
   label: CC-BY 3.0

diff --git a/ontology/ncro.md b/ontology/ncro.md
@@ -10,6 +10,7 @@ tracker: https://github.com/OmniSearch/NCRO-Ontology-Files/issues
 contact: 
   label: Jingshan Huang
   email: [email protected]
+  github: Huang-OMIT
 license:
   url: https://creativecommons.org/licenses/by/4.0/
   label: CC-BY 4

diff --git a/ontology/pato.md b/ontology/pato.md
@@ -11,6 +11,7 @@ description: An ontology of phenotypic qualities (properties, attributes or char
 contact:
   email: [email protected]
   label: George Gkoutos
+  github: gkoutos
 domain: phenotype
 homepage: https://github.com/pato-ontology/pato/
 repository: https://github.com/pato-ontology/pato/

diff --git a/ontology/po.md b/ontology/po.md
@@ -14,6 +14,7 @@ build:
 contact:
   email: [email protected]
   label: Pankaj Jaiswal
+  github: jaiswalp
 description: "The Plant Ontology is a structured vocabulary and database resource that links plant anatomy, morphology and growth and development to plant genomics data."
 domain: anatomy and development
 homepage: http://browser.planteome.org/amigo