Code

Add a time-heterogeneous SIR model#2517

Code

Merged

martinjankowiak merged 22 commits intodevpyro-ppl/pyro:devfrom sir-heterogeneouspyro-ppl/pyro:sir-heterogeneousCopy head branch name to clipboardJun 5, 2020

+293-54

Commits

Commits on May 31, 2020

• WIP sketch HeterogeneousSIRModel

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  5067a3c

• Eliminate need for .transition_bwd() method

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  4e75429

• Fix dics rendering

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  995bbe9

• Document rtype for .compute_flows()

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  e49be1e

• Merge branch 'sir-simplify-transition' into sir-heterogeneous

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  5a83bf3

• Add xfailing test

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  64e50a8

Commits on Jun 2, 2020

• Sketch non-compartmental logic

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  38d8787

• Merge branch 'dev' into sir-heterogeneous

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  68b6b79

• Use time plate

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  7a6f5ba

• Merge branch 'dev' into sir-simplify-transition

  fritzo

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  7de75e7

• Merge branch 'sir-simplify-transition' into sir-heterogeneous

  fritzo

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  d7cdcc1

Commits on Jun 3, 2020

• Fix some shaping errors

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  2e83ccd

• Get tests to pass

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  2b85198

• Add HeterogeneousSIRModel to an example

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  197c127

• Get inference working

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  8753945

• Merge branch 'dev' into sir-simplify-transition

  fritzo

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  cdc7656

• Merge branch 'sir-simplify-transition' into sir-heterogeneous

  fritzo

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  359184f

Commits on Jun 4, 2020

• Fix typos

  fritzo

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  426ce50

• Merge branch 'sir-simplify-transition' into sir-heterogeneous

  fritzo

  committed
  baf560a

• Merge branch 'dev' into sir-heterogeneous

  fritzo

  committed
  a9af2fa

• Add docs to trigger travis build

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  120eb73

• Fix typo

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  cf90219