Code

Add a time-heterogeneous SIR model#2517

Code

Merged

martinjankowiak merged 22 commits intodevpyro-ppl/pyro:devfrom sir-heterogeneouspyro-ppl/pyro:sir-heterogeneousCopy head branch name to clipboardJun 5, 2020

+293-54

Commits

Commits on May 31, 2020

• WIP sketch HeterogeneousSIRModel

  fritzo

  committed
  5067a3c

  Copy full SHA for 5067a3c

• Eliminate need for .transition_bwd() method

  fritzo

  committed
  4e75429

  Copy full SHA for 4e75429

• Fix dics rendering

  fritzo

  committed
  995bbe9

  Copy full SHA for 995bbe9

• Document rtype for .compute_flows()

  fritzo

  committed
  e49be1e

  Copy full SHA for e49be1e

• Merge branch 'sir-simplify-transition' into sir-heterogeneous

  fritzo

  committed
  5a83bf3

  Copy full SHA for 5a83bf3

• Add xfailing test

  fritzo

  committed
  64e50a8

  Copy full SHA for 64e50a8

Commits on Jun 2, 2020

• Sketch non-compartmental logic

  fritzo

  committed
  38d8787

  Copy full SHA for 38d8787

• Merge branch 'dev' into sir-heterogeneous

  fritzo

  committed
  68b6b79

  Copy full SHA for 68b6b79

• Use time plate

  fritzo

  committed
  7a6f5ba

  Copy full SHA for 7a6f5ba

• Merge branch 'dev' into sir-simplify-transition

  fritzo

  committed
  7de75e7

  Copy full SHA for 7de75e7

• Merge branch 'sir-simplify-transition' into sir-heterogeneous

  fritzo

  committed
  d7cdcc1

  Copy full SHA for d7cdcc1

Commits on Jun 3, 2020

• Fix some shaping errors

  fritzo

  committed
  2e83ccd

  Copy full SHA for 2e83ccd

• Get tests to pass

  fritzo

  committed
  2b85198

  Copy full SHA for 2b85198

• Add HeterogeneousSIRModel to an example

  fritzo

  committed
  197c127

  Copy full SHA for 197c127

• Get inference working

  fritzo

  committed
  8753945

  Copy full SHA for 8753945

• Merge branch 'dev' into sir-simplify-transition

  fritzo

  committed
  cdc7656

  Copy full SHA for cdc7656

• Merge branch 'sir-simplify-transition' into sir-heterogeneous

  fritzo

  committed
  359184f

  Copy full SHA for 359184f

Commits on Jun 4, 2020

• Fix typos

  fritzo

  committed
  426ce50

  Copy full SHA for 426ce50

• Merge branch 'sir-simplify-transition' into sir-heterogeneous

  fritzo

  committed
  baf560a

  Copy full SHA for baf560a

• Merge branch 'dev' into sir-heterogeneous

  fritzo

  committed
  a9af2fa

  Copy full SHA for a9af2fa

• Add docs to trigger travis build

  fritzo

  committed
  120eb73

  Copy full SHA for 120eb73

• Fix typo

  fritzo

  committed
  cf90219

  Copy full SHA for cf90219