reorder vignettes on pkgdown site (#727) #511
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on: | |
push: | |
branches: | |
- master | |
- main | |
pull_request: | |
branches: | |
- master | |
- main | |
name: DBs (Linux) | |
jobs: | |
database: | |
runs-on: ubuntu-latest | |
services: | |
oracle: | |
image: gvenzl/oracle-xe:21.3.0 | |
ports: | |
- 1521:1521 | |
env: | |
ORACLE_RANDOM_PASSWORD: true | |
ORACLE_DATABASE: test | |
APP_USER: RodbcR | |
APP_USER_PASSWORD: Password12 | |
options: >- | |
--health-cmd healthcheck.sh | |
--health-interval 10s | |
--health-timeout 5s | |
--health-retries 10 | |
postgres: | |
image: postgres | |
ports: | |
- 5432:5432 | |
env: | |
POSTGRES_USER: postgres | |
POSTGRES_PASSWORD: password | |
POSTGRES_DB: test | |
options: --health-cmd pg_isready --health-interval 10s --health-timeout 5s --health-retries 5 | |
sqlserver: | |
image: mcr.microsoft.com/mssql/server:2017-latest-ubuntu | |
ports: | |
- 1433:1433 | |
env: | |
ACCEPT_EULA: Y | |
SA_PASSWORD: Password12 | |
env: | |
CRAN: "https://packagemanager.rstudio.com/cran/__linux__/jammy/latest" | |
ODBCSYSINI: ${{ github.workspace }}/.github/odbc | |
TNS_ADMIN: ${{ github.workspace }}/.github/odbc | |
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
steps: | |
- uses: actions/checkout@v3 | |
- uses: r-lib/actions/setup-r@v2 | |
- name: Install MySQL Driver | |
run: | | |
sudo systemctl start mysql.service | |
mysql -uroot -h127.0.0.1 -proot -e 'CREATE DATABASE `test`;' | |
sudo apt-get install -y odbc-mariadb | |
echo "ODBC_CS_MYSQL=dsn=MySQL" >> $GITHUB_ENV | |
- name: Install SQLite Driver | |
run: | | |
sudo apt-get install -y libsqliteodbc | |
echo "ODBC_CS_SQLITE=dsn=SQLite" >> $GITHUB_ENV | |
- name: Install PostgreSQL Driver | |
run: | | |
sudo apt-get install -y unixodbc-dev odbc-postgresql devscripts | |
echo "ODBC_CS_POSTGRES=dsn=PostgreSQL" >> $GITHUB_ENV | |
- name: Install SQL Server Driver | |
run: | | |
echo "ODBC_CS_SQLSERVER=dsn=MicrosoftSQLServer;UID=SA;PWD=Password12" >> $GITHUB_ENV | |
sudo bash -c " | |
curl https://packages.microsoft.com/keys/microsoft.asc | apt-key add - \ | |
&& curl https://packages.microsoft.com/config/ubuntu/16.04/prod.list > /etc/apt/sources.list.d/mssql-release.list \ | |
&& apt-get update \ | |
&& ACCEPT_EULA=Y apt-get install -y msodbcsql17 \ | |
&& ln -s /opt/microsoft/msodbcsql17/lib64/libmsodbcsql-17.*.so.* /opt/microsoft/msodbcsql17/lib64/libmsodbcsql-17.so" | |
- name: Install Oracle Driver | |
run: | | |
.github/odbc/install-oracle-driver.sh | |
echo "LD_LIBRARY_PATH=/opt/oracle/instantclient_21_12:$LD_LIBRARY_PATH" >> $GITHUB_ENV | |
echo "ODBC_CS_ORACLE=dsn=Oracle;UID=RodbcR;PWD=Password12;DBQ=test" >> $GITHUB_ENV | |
- name: Install dependencies | |
uses: r-lib/actions/setup-r-dependencies@v2 | |
with: | |
needs: check | |
- name: Install locally to avoid error with test_local() | |
run: | | |
R CMD INSTALL . | |
env: | |
LIB_DIR: /usr/lib/x86_64-linux-gnu/ | |
INCLUDE_DIR: /usr/include | |
- name: Test | |
run: | | |
testthat::test_local(reporter = testthat::ProgressReporter$new(max_failures = Inf, update_interval = Inf)) | |
shell: Rscript {0} |