R-CMD-check

Clean up documentation, configuration, and CI following S2 version update #393

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Run time

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Job	Run time
test	3m 30s
macos-latest (release)	4m 7s
windows-latest (4.2)	13m 16s
windows-latest (4.3)	11m 35s
windows-latest (release)	10m 37s
ubuntu-latest (devel)	1m 18s
ubuntu-latest (release)	1m 14s
ubuntu-latest (oldrel-1)	1m 29s
	47m 6s