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ctfile2x3d

Utilities to convert MDL CTFiles into X3D.

Thid project was inspired by Asad's atom-atom mapping tool which would allow me to create animations for biochemical reactions:

Rahman, S.A. et.al.(2014) EC-BLAST: A Tool to Automatically Search and Compare Enzyme Reactions, Nature Methods.

Directories and contents:

  • x3d: JAXB-generated java package for X3D schemas.
  • ctfile2x3d-lib: main library with parsers for CTFiles.
  • ctfile2x3d-webapp: sample web application delivering X3D content.

Requirements:

  • Maven 3 (for building)
  • Java 7
  • Tomcat 6 (or other webapp container) and HTML5-capable browser (for webapp)

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Utilities to convert MDL CTFiles into X3D.

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