Update to maybe work with non-editable installs

ci/test_python.sh

@@ -110,23 +110,23 @@ popd
 
 rapids-logger "pytest networkx using nx-cugraph backend"
 pushd python/nx-cugraph
-rm nx_cugraph/.coverage
-env
-conda list
-./run_nx_tests.sh
+mkdir new_directory_for_coverage
+cd new_directory_for_coverage
+env  # XXX: delete me
+conda list  # XXX: delete me
+../run_nx_tests.sh
 # run_nx_tests.sh outputs coverage data, so check that total coverage is >0.0%
 # in case nx-cugraph failed to load but fallback mode allowed the run to pass.
 _coverage=$(coverage report|grep "^TOTAL")
 echo "nx-cugraph coverage from networkx tests: $_coverage"
 echo $_coverage | awk '{ if ($NF == "0.0%") exit 1 }'
 # Ensure all algorithms were called by comparing covered lines to function lines.
 # Run our tests again (they're fast enough) to add their coverage, then create coverage.json
-coverage report
-coverage report --data-file=.coverage --rcfile=pyproject.toml
-pytest --cov=nx_cugraph --cov-append --cov-config=pyproject.toml
-coverage json --data-file=.coverage
-cat coverage.json
-python nx_cugraph/tests/ensure_algos_covered.py
+coverage report --rcfile=../pyproject.toml  # XXX: delete me
+pytest --pyargs nx_cugraph --cov=nx_cugraph --cov-append --cov-config=../pyproject.toml
+coverage json --rcfile=../pyproject.toml
+cat coverage.json  # XXX: delete me
+python -m nx_cugraph.tests.ensure_algos_covered
 popd
 
 rapids-logger "pytest cugraph-service (single GPU)"

python/nx-cugraph/nx_cugraph/tests/ensure_algos_covered.py

@@ -25,7 +25,7 @@
     coverage = json.load(f)
 
 filenames_to_executed_lines = {
-    filename: set(coverage_info["executed_lines"])
+    filename.rsplit("nx-cugraph/", 1)[-1]: set(coverage_info["executed_lines"])
     for filename, coverage_info in coverage["files"].items()
 }
 

python/nx-cugraph/run_nx_tests.sh

@@ -31,11 +31,11 @@ NETWORKX_FALLBACK_TO_NX=True \
     pytest \
     --pyargs networkx \
     --cov=nx_cugraph \
-    --cov-config=pyproject.toml \
+    --cov-config=$(dirname $0)/pyproject.toml \
     "$@"
+    # --cov-report=  # XXX: uncomment me and move me above
 coverage report \
-    --include="nx_cugraph/algorithms/*" \
+    --include="*/nx_cugraph/algorithms/*" \
     --omit=__init__.py \
     --show-missing \
-    --data-file=.coverage \
-    --rcfile=pyproject.toml
+    --rcfile=$(dirname $0)/pyproject.toml