fix: Quarkus Dev Mode is having trouble running main module by using Gradle with Kotlin DSL

src/main/java/com/redhat/devtools/intellij/quarkus/QuarkusModuleUtil.java

@@ -31,10 +31,7 @@
 import org.slf4j.LoggerFactory;
 
 import java.io.File;
-import java.util.Arrays;
-import java.util.HashSet;
-import java.util.Optional;
-import java.util.Set;
+import java.util.*;
 import java.util.function.Predicate;
 import java.util.regex.Matcher;
 import java.util.regex.Pattern;
@@ -52,6 +49,7 @@ public class QuarkusModuleUtil {
 
     public static final Pattern APPLICATION_YAML = Pattern.compile("application(-.+)?\\.ya?ml");
 
+    private static final Comparator<VirtualFile> ROOT_COMPARATOR = Comparator.comparingInt(r -> r.getPath().length());
 
     /**
      * Check if the module is a Quarkus project. Should check if some class if present
@@ -152,6 +150,34 @@ private static boolean isQuarkusModule(VirtualFile file, Project project) {
     }
 
     public static @Nullable VirtualFile getModuleDirPath(@NotNull Module module) {
-        return LocalFileSystem.getInstance().findFileByPath(ModuleUtilCore.getModuleDirPath(module));
+        VirtualFile[] roots = getContentRoots(module);
+        if (roots.length > 0) {
+            return roots[0];
+        }
+        return VfsUtil.findFileByIoFile(new File(ModuleUtilCore.getModuleDirPath(module)), true);
+    }
+
+    /**
+     * Returns an array of content roots of the given module sorted with smallest path first (to eliminate generated sources roots) from all content entries.
+     *
+     * @param module the module
+     * @return the array of content roots.
+     */
+    public static VirtualFile[] getContentRoots(Module module) {
+        VirtualFile[] roots = ModuleRootManager.getInstance(module).getContentRoots();
+        if (roots.length <= 1) {
+            return roots;
+        }
+        // put root with smallest path first (eliminates generated sources roots)
+        sortRoot(roots);
+        return roots;
+    }
+
+    public static void sortRoot(List<VirtualFile> roots) {
+        Collections.sort(roots, ROOT_COMPARATOR); // put root with smallest path first (eliminates generated sources roots)
+    }
+
+    public static void sortRoot(VirtualFile[] roots) {
+        Arrays.sort(roots, ROOT_COMPARATOR); // put root with smallest path first (eliminates generated sources roots)
     }
 }

src/main/java/com/redhat/devtools/intellij/qute/psi/core/command/QuteAction.java

@@ -11,14 +11,9 @@
 package com.redhat.devtools.intellij.qute.psi.core.command;
 
 import com.google.gson.JsonPrimitive;
-import com.intellij.openapi.actionSystem.AnAction;
-import com.intellij.openapi.actionSystem.AnActionEvent;
-import com.redhat.devtools.lsp4ij.commands.CommandExecutor;
 import com.redhat.devtools.lsp4ij.commands.LSPCommand;
 import com.redhat.devtools.lsp4ij.commands.LSPCommandAction;
 
-import java.util.List;
-
 public abstract class QuteAction extends LSPCommandAction {
 
     protected String getURL(LSPCommand command) {

src/main/java/com/redhat/devtools/intellij/qute/psi/core/command/QuteGenerateTemplateAction.java

@@ -17,9 +17,7 @@
 import com.intellij.openapi.vfs.VfsUtil;
 import com.intellij.openapi.vfs.VirtualFile;
 import com.redhat.devtools.lsp4ij.LanguageServiceAccessor;
-import com.redhat.devtools.lsp4ij.commands.CommandExecutor;
 import com.redhat.devtools.lsp4ij.commands.LSPCommand;
-import org.eclipse.lsp4j.Command;
 import org.eclipse.lsp4j.ExecuteCommandOptions;
 import org.eclipse.lsp4j.ExecuteCommandParams;
 import org.eclipse.lsp4j.services.LanguageServer;

src/main/java/com/redhat/devtools/intellij/qute/psi/utils/PsiQuteProjectUtils.java

@@ -44,7 +44,6 @@ public class PsiQuteProjectUtils {
      * Value for Qute annotations indicating behaviour should be using the default
      */
     private static final String DEFAULTED = "<<defaulted>>";
-    private static final Comparator<VirtualFile> ROOT_COMPARATOR = Comparator.comparingInt(r -> r.getPath().length());
 
     private PsiQuteProjectUtils() {
     }
@@ -104,7 +103,7 @@ private static String getTemplateBaseDir(Module javaProject) {
     public static @Nullable VirtualFile findBestResourcesDir(@NotNull Module javaProject) {
         List<VirtualFile> resourcesDirs = ModuleRootManager.getInstance(javaProject).getSourceRoots(JavaResourceRootType.RESOURCE);
         if (!resourcesDirs.isEmpty()) {
-            Collections.sort(resourcesDirs, ROOT_COMPARATOR); // put root with smallest path first (eliminates generated sources roots)
+            QuarkusModuleUtil.sortRoot(resourcesDirs); // put root with smallest path first (eliminates generated sources roots)
             // The module configure 'Resources folder'
             // 1) loop for each configured resources dir and returns the first which contains 'templates' folder.
             for (var dir : resourcesDirs) {
@@ -117,10 +116,6 @@ private static String getTemplateBaseDir(Module javaProject) {
             return resourcesDirs.get(0);
         }
         // Corner usecase, the module doesn't configure 'Resources folder', use the first content roots
-        VirtualFile[] roots = getContentRoots(javaProject);
-        if (roots.length > 0) {
-            return roots[0];
-        }
         return QuarkusModuleUtil.getModuleDirPath(javaProject);
     }
 
@@ -131,12 +126,7 @@ private static String getTemplateBaseDir(Module javaProject) {
      * @return the array of content roots.
      */
     public static VirtualFile[] getContentRoots(Module module) {
-        VirtualFile[] roots = ModuleRootManager.getInstance(module).getContentRoots();
-        if (roots.length <= 1) {
-            return roots;
-        }
-        Arrays.sort(roots, ROOT_COMPARATOR); // put root with smallest path first (eliminates generated sources roots)
-        return roots;
+        return QuarkusModuleUtil.getContentRoots(module);
     }
 
     /**