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[AUTO] Update data #188

Merged
merged 1 commit into from
Jun 17, 2024
Merged

[AUTO] Update data #188

merged 1 commit into from
Jun 17, 2024

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PietrH-bot
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Brief description

This is an automatically generated PR.
The following steps are all automatically performed:

  • Fetch raw data
  • Map raw data to DwC standard and save the output in ./data/processed
  • Get an overview of the changes
  • Run some tests, e.g. check the uniqueness of occurrenceID, check that all occurrences have a eventID and scientificName, ...

Note to the reviewer: the workflow automation is still in a development phase. Please, check the output thoroughly before merging to main. In case, improve the data fecthing fetch_data.Rmd, the mapping dwc_mapping.Rmd, both in ./src or the GitHub workflows fetch-data.yaml and mapping_and_testing.yaml in ./.github/workflows.

Files changed:
M	data/processed/occurrence.csv
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PietrH commented Jun 17, 2024

eventIDs are not always the same length

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PietrH commented Jun 17, 2024

595 new records, no deleted records. No new species.

9 species:

scientificName n
Rattus norvegicus 471
Ondatra zibethicus 72
Vespa velutina 30
Heracleum mantegazzianum 10
Martes foina 4
Trachemys scripta 4
Alopochen aegyptiaca 2
Branta canadensis 1
Fallopia japonica 1

On 5 days:

date n
2024-05-28 202
2024-05-27 198
2024-05-30 110
2024-05-31 78
2024-05-29 7

@PietrH PietrH merged commit e41b6ff into main Jun 17, 2024
1 check passed
@PietrH PietrH deleted the automatic-update-2024-06-15T03-50-32Z branch June 17, 2024 09:50
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2 participants