Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

[AUTO] Update data #196

Merged
merged 1 commit into from
Aug 1, 2024
Merged

[AUTO] Update data #196

merged 1 commit into from
Aug 1, 2024

Conversation

PietrH-bot
Copy link
Collaborator

Brief description

This is an automatically generated PR.
The following steps are all automatically performed:

  • Fetch raw data
  • Map raw data to DwC standard and save the output in ./data/processed
  • Get an overview of the changes
  • Run some tests, e.g. check the uniqueness of occurrenceID, check that all occurrences have a eventID and scientificName, ...

Note to the reviewer: the workflow automation is still in a development phase. Please, check the output thoroughly before merging to main. In case, improve the data fecthing fetch_data.Rmd, the mapping dwc_mapping.Rmd, both in ./src or the GitHub workflows fetch-data.yaml and mapping_and_testing.yaml in ./.github/workflows.

Files changed:
M	data/processed/occurrence.csv
@PietrH
Copy link
Member

PietrH commented Aug 1, 2024

663 new records, no deleted records. No new species.

9 species:

scientificName n
Rattus norvegicus 530
Ondatra zibethicus 63
Vespa velutina 25
Branta canadensis 15
Trachemys scripta 9
Heracleum mantegazzianum 8
Martes foina 6
Anatidae 5
Fallopia japonica 2

On 6 days:

date n
2024-06-25 229
2024-06-24 156
2024-06-26 126
2024-06-27 84
2024-06-28 67
2024-07-01 1

@PietrH PietrH merged commit 1c021e4 into main Aug 1, 2024
1 check passed
@PietrH PietrH deleted the automatic-update-2024-07-15T03-28-28Z branch August 1, 2024 12:09
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants