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  1. smith-chem-wisc/MetaMorpheus smith-chem-wisc/MetaMorpheus Public

    Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities

    C# 90 45

  2. smith-chem-wisc/FlashLFQ smith-chem-wisc/FlashLFQ Public

    Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics

    C# 19 15

  3. stewart-lab/kinderminer_kg stewart-lab/kinderminer_kg Public

    Build a knowledge graph from PubMed abstracts using KinderMiner, Prodigy, and spaCy

    Python 4

  4. stewart-lab/fast_km stewart-lab/fast_km Public

    A Containerized KinderMiner / Serial KinderMiner Server

    Python 2