Skip to content
@rsinghlab

Singh Lab @ Brown

Repository for projects developed in the lab

Popular repositories Loading

  1. MADDi MADDi Public

    This repository is for the Multimodal Alzheimer’s Disease Diagnosis framework (MADDi).

    Jupyter Notebook 86 17

  2. pyaging pyaging Public

    A Python-based compendium of GPU-optimized aging clocks.

    Jupyter Notebook 86 3

  3. SCOT SCOT Public

    Gromov-Wasserstein based optimal transport for aligning single-cell multi-omics data

    Jupyter Notebook 67 17

  4. AltumAge AltumAge Public

    Jupyter Notebook 29 9

  5. GNN-Tumor-Seg GNN-Tumor-Seg Public

    Using Graph Neural Networks to Segment MRIs of Brain Tumors

    Python 21 4

  6. scNODE scNODE Public

    scNODE: Generative Model for Temporal Single Cell Transcriptomic Data Prediction

    Jupyter Notebook 18 2

Repositories

Showing 10 of 24 repositories
  • rsinghlab/ML_epigenetic_features_glioblastoma’s past year of commit activity
    Python 0 MIT 1 0 0 Updated Feb 4, 2025
  • STING Public

    Spatial Transcriptomics cluster Inference with Nested GNNs

    rsinghlab/STING’s past year of commit activity
    Python 0 0 0 0 Updated Jan 24, 2025
  • HistoneClocks Public

    This repository contains the code and data to reproduce the results of our paper entitled "Histone mark age of human tissues and cells".

    rsinghlab/HistoneClocks’s past year of commit activity
    Jupyter Notebook 2 MIT 0 0 0 Updated Jan 3, 2025
  • pyaging Public

    A Python-based compendium of GPU-optimized aging clocks.

    rsinghlab/pyaging’s past year of commit activity
    Jupyter Notebook 86 BSD-3-Clause 3 1 0 Updated Dec 26, 2024
  • TimeFlies Public
    rsinghlab/TimeFlies’s past year of commit activity
    Jupyter Notebook 2 0 0 0 Updated Nov 18, 2024
  • scMultiNODE Public

    scMultiNODE: Temporal Single-Cell Data Integration across Unaligned Modalities

    rsinghlab/scMultiNODE’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Nov 1, 2024
  • QZERO Public

    Retrieval Augmented Zero-Shot Text Classification

    rsinghlab/QZERO’s past year of commit activity
    Python 5 0 0 0 Updated Nov 1, 2024
  • scNODE Public

    scNODE: Generative Model for Temporal Single Cell Transcriptomic Data Prediction

    rsinghlab/scNODE’s past year of commit activity
    Jupyter Notebook 18 MIT 2 2 0 Updated Oct 11, 2024
  • OvO Public
    rsinghlab/OvO’s past year of commit activity
    Jupyter Notebook 11 MIT 1 0 0 Updated Sep 30, 2024
  • GC-MERGE Public

    This is the repository for the long-range interaction GCNN for predicting gene expression for the Singh Lab.

    rsinghlab/GC-MERGE’s past year of commit activity
    Python 5 MIT 1 3 0 Updated Sep 11, 2024

Top languages

Loading…

Most used topics

Loading…