updated bioc version

rstudio · Aug 11, 2023 · 7e954a4 · 7e954a4
1 parent 6ae93b2
commit 7e954a4
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Showing 2 changed files with 7 additions and 5 deletions.
diff --git a/tests/testthat/test-bundlePackagePackrat.R b/tests/testthat/test-bundlePackagePackrat.R
@@ -37,25 +37,27 @@ test_that("recommended packages are snapshotted", {
 })
 
 test_that("works with BioC packages", {
+  skip_on_cran()
+  skip_on_ci()
   app <- local_temp_app(list("index.Rmd" = c(
     "```{r}",
     "library(Biobase)",
     "```"
   )))
   withr::local_options(repos = c(
     CRAN = "https://cran.rstudio.com",
-    BioC = "https://bioconductor.org/packages/3.16/bioc"
+    BioC = "https://bioconductor.org/packages/3.17/bioc"
   ))
 
   deps <- snapshotPackratDependencies(app)
 
   Biobase <- deps[deps$Package == "Biobase", ]
   expect_equal(Biobase$Source, "Bioconductor")
-  expect_equal(Biobase$Repository, "https://bioconductor.org/packages/3.16/bioc")
+  expect_equal(Biobase$Repository, "https://bioconductor.org/packages/3.17/bioc")
 
   BiocGenerics <- deps[deps$Package == "BiocGenerics", ]
   expect_equal(BiocGenerics$Source, "Bioconductor")
-  expect_equal(BiocGenerics$Repository, "https://bioconductor.org/packages/3.16/bioc")
+  expect_equal(BiocGenerics$Repository, "https://bioconductor.org/packages/3.17/bioc")
 })
 
 # addPackratSnapshot() ----------------------------------------------------

diff --git a/tests/testthat/test-bundlePackageRenv.R b/tests/testthat/test-bundlePackageRenv.R
@@ -33,15 +33,15 @@ test_that("works with BioC packages", {
   )))
   withr::local_options(repos = c(
     CRAN = "https://cran.rstudio.com",
-    BioC = "https://bioconductor.org/packages/3.16/bioc"
+    BioC = "https://bioconductor.org/packages/3.17/bioc"
   ))
   expect_no_condition(
     deps <- snapshotRenvDependencies(app),
     class = "rsconnect_biocRepos"
   )
   Biobase <- deps[deps$Package == "Biobase", ]
   expect_equal(Biobase$Source, "Bioconductor")
-  expect_equal(Biobase$Repository, "https://bioconductor.org/packages/3.16/bioc")
+  expect_equal(Biobase$Repository, "https://bioconductor.org/packages/3.17/bioc")
 
   withr::local_options(repos = c(
     CRAN = "https://cran.rstudio.com"