GitHub - rvmoriarty/SIV_MultiplexPCR: Scripts used in multiplex pcr data analysis March 2019

rvmoriarty / SIV_MultiplexPCR Public

Scripts used in multiplex pcr data analysis March 2019

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Name		Name	Last commit message	Last commit date
Latest commit History 6 Commits
NucleotideCountTables.R		NucleotideCountTables.R
SIVMultiplexDataAnalysis.README.md		SIVMultiplexDataAnalysis.README.md
SIVMultiplexDataAnalysis.sh		SIVMultiplexDataAnalysis.sh
SIVmac239-amplicons_evens.fasta		SIVmac239-amplicons_evens.fasta
SIVmac239-amplicons_odds.fasta		SIVmac239-amplicons_odds.fasta
VCFtoCSV.R		VCFtoCSV.R
mapReadsCallVariants_SIV.py		mapReadsCallVariants_SIV.py
normalizeShortAmpliconCoverage_qtrim_forcetrimleft.py		normalizeShortAmpliconCoverage_qtrim_forcetrimleft.py
prepareNcbiReference.py		prepareNcbiReference.py