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build(deps): bump cutadapt from 4.6 to 4.8 #16

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@dependabot dependabot bot commented on behalf of github Apr 15, 2024

Bumps cutadapt from 4.6 to 4.8.

Changelog

Sourced from cutadapt's changelog.

v4.8 (2024-04-12)

  • :issue:772: Restore ability to provide input files via process substitution.
  • :issue:773: Fix crash when writing interleaved data to stdout (that is, when no -o option is provided).

v4.7 (2024-03-14)

  • :issue:767: Error messages are always sent to stderr. They were previously sent to stdout when using -o.
  • Cutadapt can now read single-end data from unaligned BAM files (uBAM).
  • Dropped support for Python 3.7.
Commits
  • 33df545 Run process substitution test only on Linux
  • ef2aa2d Version 4.8 changelog
  • 55ffe6e Revert "Switch to "spawn" method"
  • 76437b5 Test providing input file via process substitution
  • 8e444ac Do not hang when the reader process encounters an error
  • 1f6925c Fix typing problem
  • 525a39d Fix writing interleaved data to stdout
  • 9093ef7 Mention POSIX platform
  • 1cf43d8 FreeBSD ports and pkgsrc
  • e82bea1 Artifact names now have to be unique
  • Additional commits viewable in compare view

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Bumps [cutadapt](https://github.com/marcelm/cutadapt) from 4.6 to 4.8.
- [Release notes](https://github.com/marcelm/cutadapt/releases)
- [Changelog](https://github.com/marcelm/cutadapt/blob/main/CHANGES.rst)
- [Commits](marcelm/cutadapt@v4.6...v4.8)

---
updated-dependencies:
- dependency-name: cutadapt
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <[email protected]>
@dependabot dependabot bot added the dependencies Pull requests that update a dependency file label Apr 15, 2024
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