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Updated link to paper
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christianholland committed Mar 31, 2021
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2 changes: 1 addition & 1 deletion README.Rmd
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### About
ReHeaT is a user friendly portal to explore, analyze and download the transcriptional consensus signature of human end-stage heart failure (HF-CS).

The HF-CS is based on a [meta-analysis](https://www.medrxiv.org/content/10.1101/2020.05.23.20110858v1) of 16 independent studies. Corresponding code is available [here](https://github.com/saezlab/HF_meta-analysis).
The HF-CS is based on a [meta-analysis](https://doi.org/10.1101/2020.05.23.20110858) of 16 independent studies. Corresponding code is available [here](https://github.com/saezlab/HF_meta-analysis).

### How to access

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14 changes: 5 additions & 9 deletions README.md
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Expand Up @@ -18,34 +18,30 @@ transcriptional consensus signature of human end-stage heart failure
(HF-CS).

The HF-CS is based on a
[meta-analysis](https://www.medrxiv.org/content/10.1101/2020.05.23.20110858v1)
of 16 independent studies. Corresponding code is available
[meta-analysis](https://doi.org/10.1101/2020.05.23.20110858) of 16
independent studies. Corresponding code is available
[here](https://github.com/saezlab/HF_meta-analysis).

### How to access

There are basically three ways of how to access ReHeaT:

- You can access a live version running
- You can access a live version running
[here](https://saezlab.shinyapps.io/reheat/) on the server from
`shinyapps.io`.

- You can run the app locally in an interactive R session. Before make
- You can run the app locally in an interactive R session. Before make
sure you have all packages installed listed in
[`sub/global.R`](https://github.com/saezlab/reheat/blob/master/sub/global.R).

<!-- end list -->

``` r
shiny::runGitHub("reheat", "saezlab")
```

- You can run the app locally by cloning this repository. All required
- You can run the app locally by cloning this repository. All required
packages can be easily installed using the
[`renv`](https://rstudio.github.io/renv/index.html) package.

<!-- end list -->

``` r
# install all required packages using the renv package
renv::restore()
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