Try conda directive and -with-wave

sanger-tol · Apr 26, 2024 · ebc8bc4 · ebc8bc4
1 parent 5f10844
commit ebc8bc4
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diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml
@@ -61,4 +61,4 @@ jobs:
 
       - name: Run pipeline with test data
         run: |
-          nextflow run ${GITHUB_WORKSPACE} -profile test_github,singularity --outdir ./results
+          nextflow run ${GITHUB_WORKSPACE} -profile test_github,singularity --outdir ./results -with-wave
diff --git a/modules/nf-core/hifiasm/main.nf b/modules/nf-core/hifiasm/main.nf