In the very beginning, initialize directories: python mk_dir.py, to set coefficients, T, and directories ########################################## #this project uses PBC

in this project, random seeds are set in 1 place, in ./init_run_scripts/load_previous_data.py

########################################## To manually perform each step of computations

1. python launch_one_run.py ./path/to/mc.conf
2. make run_mc
3. ./run_mc ./path/to/cppIn.txt
4. python check_after_one_run_U.py ./path/to/mc.conf startingFileIndSuggest
5. go to 1, until no more data points are needed

######################################### To run 1 pass of mc with checking statistics of U

1. cmake .
2. make run_mc
3. python exec_checking_U.py T N startingFileIndSuggest
4. run 3 until equilibrium
5. python exec_noChecking.py T N

After checking U, one may check statistics for dipole. 1. To check dipole for 1 temperature: python check_after_one_run_dipole.py ./path/to/mc.conf startingFileIndSuggest to check all dipoles seqentially: python loop_check_dipoles_all_T.py N startingFileIndSuggest

############################# after mc completes,

1. cd data2csv/
2. python pkl_U_data2csv.py N
3. python pkl_dipole_data2csv.py N

############################# #plots for plotting physical quantities, cd ./plt/

1. python xxx_data_csv_2_plt.py N
2. python load_csv_plt_xxx.py N

for plotting lattices and dipoles cd ./pltLattice/

1. python batch_lattice_dipole.py N
2. python batch_plt_dipoles_all_T.py N

############################# #make movies cd ./mk_movie

###############################

computing in branches:

This part is after the equilibrium of the main computation path for the j-th branch, j=0,1,2,...,M-1

1. python execute_branch_computation/init_branch.py N T obs_name branch_path_ind total_branch_num
2. python branch_exec_noChecking_dipole.py N T obs_name branch_path_ind total_branch_num
3. after branch computations finish, cd branch_data2csv, python main_and_branch_pkl_dipole_data2csv.py N T