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  1. KrishnaswamyLab/PHATE Public

    PHATE (Potential of Heat-diffusion for Affinity-based Transition Embedding) is a tool for visualizing high dimensional data.

    Python 490 76

  2. KrishnaswamyLab/MAGIC Public

    MAGIC (Markov Affinity-based Graph Imputation of Cells), is a method for imputing missing values restoring structure of large biological datasets.

    Jupyter Notebook 353 94

  3. KrishnaswamyLab/graphtools Public

    Tools for building and manipulating graphs in Python

    Python 41 15

  4. KrishnaswamyLab/scprep Public

    A collection of scripts and tools for loading, processing, and handling single cell data.

    Python 72 20

  5. m-phate Public

    Multislice PHATE for tensor embeddings

    Python 59 8

  6. picopore Public

    A tool to reduce the size of Oxford Nanopore Technologies' datasets without losing information

    Python 31 5

19 contributions in the last year

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Loading A graph representing scottgigante's contributions from March 24, 2024 to March 24, 2025. The contributions are 47% commits, 23% code review, 24% pull requests, 6% issues.

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March 2025

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