revise githubactions

sebastien-plutniak · Jul 7, 2024 · 6343db3 · 6343db3
1 parent 7445631
commit 6343db3
Showing 1 changed file with 8 additions and 7 deletions.
diff --git a/.github/workflows/r.yml b/.github/workflows/r.yml
@@ -37,45 +37,45 @@ jobs:
         with:
           r-version: ${{ matrix.r-version }}
       - name: Install Dependencies (Windows)
-        run: choco install pandoc
         if: matrix.config.os == 'windows-latest'  
+        run: choco install pandoc texlive
       - name: Install Dependencies (Linux)
-        run: sudo apt-get install pandoc libcurl4-openssl-dev libudunits2-dev libgdal-dev
         if: matrix.config.os == 'ubuntu-24.04'  
+        run: sudo apt-get install pandoc libcurl4-openssl-dev libudunits2-dev libgdal-dev texlive-latex-base
       - name: Install Dependencies (macOS)
-        run: brew install pandoc udunits gdal
         if: matrix.config.os == 'macOS-latest'
+        run: brew install pandoc udunits gdal
       - name: Install R dependencies (macOs)
+        if: matrix.config.os == 'macOS-latest'          
         run: |
           install.packages(c("remotes", "rcmdcheck", "plotly", "SEAHORS"))
           remotes::install_deps(dependencies = TRUE)
-        if: matrix.config.os == 'macOS-latest'          
         shell: Rscript {0}    
       - name: Install R dependencies (windows, R '4.4.1')
+        if: ${{ (matrix.config.os == 'windows-latest') && (matrix.r-version == '4.4.1') }}
         run: |
           install.packages(c("rlang", "remotes", "rcmdcheck", "sf", "Morpho", "stringi", "rgl"), INSTALL_opts = c("--no-multiarch"))
           install.packages(c("xfun", "stringi"), type="binary", INSTALL_opts = c("--no-multiarch"))
           remotes::install_github("dmurdoch/rgl", INSTALL_opts = c("--no-multiarch"))
           remotes::install_deps(dependencies = TRUE, INSTALL_opts = c("--no-multiarch"))
         env: 
            GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}  
-        if: ${{ (matrix.config.os == 'windows-latest') && (matrix.r-version == '4.4.1') }}
         shell: Rscript {0}      
       - name: Install R dependencies (windows, R '3.6.3')
+        if: ${{ (matrix.config.os == 'windows-latest') && (matrix.r-version == '3.6.3') }}
         run: |
           install.packages(c("remotes", "rcmdcheck", "sf", "purrr", "Morpho", "plyr", "tidyr", "plotly", "testthat", "shiny", "cxhull"), INSTALL_opts = c("--no-multiarch"))
           install.packages(c("rlang", "Rcpp", "htmltools", "digest", "cxhull"), type="binary", INSTALL_opts = c("--no-multiarch"))
           remotes::install_github("dmurdoch/rgl")
           remotes::install_deps(dependencies = TRUE)
         env: 
            GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
-        if: ${{ (matrix.config.os == 'windows-latest') && (matrix.r-version == '3.6.3') }}
         shell: Rscript {0}              
       - name: Install R dependencies (Ubuntu)
+        if: matrix.config.os == 'ubuntu-24.04'  
         run: |
           install.packages(c("remotes", "curl", "pkgbuild", "rcmdcheck", "purrr", "sf", "Morpho", "cxhull", "Rvcg", "SEAHORS", "svglite", "knitr"))
           remotes::install_deps(dependencies = TRUE)
-        if: matrix.config.os == 'ubuntu-24.04'  
         shell: Rscript {0}
       - name: Check
         run: rcmdcheck::rcmdcheck(args = "--no-manual", error_on = "error")
@@ -87,6 +87,7 @@ jobs:
         with:
           extra-packages: covr
       - name: Test coverage
+        if: ${{ (failure()) && ( matrix.config.os == 'ubuntu-24.04' ) }}  
         run: covr::codecov(
             quiet = FALSE,
             clean = FALSE,