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Improve SAM tag handling
feature/proposal
a new feature or an idea of
#3283
opened Aug 12, 2024 by
eseiler
Score prealigned sequences
question
a user question how to do certain things
#3282
opened Aug 9, 2024 by
tkramer-motion
Multi-threading, banding, other speed-ups
question
a user question how to do certain things
#3255
opened May 19, 2024 by
jaysunl
appending records to a .bam
question
a user question how to do certain things
#3250
opened Mar 5, 2024 by
notestaff
single-thread mode
feature/proposal
a new feature or an idea of
question
a user question how to do certain things
#3239
opened Feb 23, 2024 by
notestaff
creating SAM file headers
documentation
documentation is missing to close this issue
feature/proposal
a new feature or an idea of
#3235
opened Feb 16, 2024 by
notestaff
Convert vertor<dna5> to std:string
question
a user question how to do certain things
#3218
opened Dec 17, 2023 by
nhhaidee
output_sequence1_id and output_sequence2_id are same
bug
faulty or wrong behaviour of code
#3205
opened Nov 8, 2023 by
Jappy0
alignment slice positions
question
a user question how to do certain things
#3203
opened Nov 1, 2023 by
notestaff
several same-score pairwise alignments
question
a user question how to do certain things
#3198
opened Oct 11, 2023 by
notestaff
Tests fail to compile
bug
faulty or wrong behaviour of code
response needed
stalled since more user information is needed
#3191
opened Sep 10, 2023 by
yurivict
2 tasks done
Use OS/system packaged sdsl library
question
a user question how to do certain things
#3162
opened Jul 2, 2023 by
kbipinkumar
[Alignment] Is there a way to run align_pairwise without traceback?
question
a user question how to do certain things
#3045
opened Aug 12, 2022 by
leannmlindsey
[IO] BAM index support
feature/proposal
a new feature or an idea of
#2985
opened May 21, 2022 by
jay-tux
[IO] VCF/BCF support
question
a user question how to do certain things
#2953
opened Mar 26, 2022 by
cauliyang
[Alphabet] seqan3::concatenated_sequences benchmark
ready to tackle
Fully specified, discussed and understood. Can be tackled.
#2951
opened Mar 21, 2022 by
smehringer
7 tasks
[Search] Query the text size
feature/proposal
a new feature or an idea of
#2934
opened Jan 26, 2022 by
joergi-w
[IO] Access list of file extensions of seqan3 I/O input classes
feature/proposal
a new feature or an idea of
#2927
opened Jan 10, 2022 by
Irallia
[Search] XOR Filters
feature/proposal
a new feature or an idea of
#2925
opened Jan 7, 2022 by
JensUweUlrich
[IO] Parsing for genome alignment formats (MAF and HAL)
feature/proposal
a new feature or an idea of
#2903
opened Nov 25, 2021 by
bkille
[Search] Shapes are the wrong way around
question
a user question how to do certain things
#2832
opened Sep 24, 2021 by
MitraDarja
[Alphabet] Alphabet types can no longer be constructed using their rank
documentation
documentation is missing to close this issue
ready to tackle
Fully specified, discussed and understood. Can be tackled.
#2745
opened Jun 9, 2021 by
tloka
[IO] Is there a neat way to pass only selected fields to SAM output?
documentation
documentation is missing to close this issue
question
a user question how to do certain things
ready to tackle
Fully specified, discussed and understood. Can be tackled.
#2436
opened Mar 9, 2021 by
tloka
[Infra] Python bindings
feature/proposal
a new feature or an idea of
#2232
opened Nov 2, 2020 by
BjornFJohansson
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