Merge pull request #29 from seqeralabs/fastp

Fastp
seqeralabs · Jul 31, 2023 · 672e14b · 672e14b
2 parents 68ea963 + 0539fcc
commit 672e14b
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diff --git a/recipes/fastp/build.sh b/recipes/fastp/build.sh
@@ -0,0 +1,6 @@
+#!/bin/bash
+set -eu -o pipefail
+mkdir -p $PREFIX/bin
+
+make INCLUDE_DIRS="$PREFIX/include" LIBRARY_DIRS="$PREFIX/lib"
+make install
diff --git a/recipes/fastp/meta.yaml b/recipes/fastp/meta.yaml
@@ -0,0 +1,35 @@
+{% set version="0.23.4" %}
+
+package:
+  name: fastp
+  version: {{ version }}
+
+source:
+  url: https://github.com/OpenGene/fastp/archive/v{{ version }}.tar.gz
+  sha256: 4fad6db156e769d46071add8a778a13a5cb5186bc1e1a5f9b1ffd499d84d72b5
+
+build:
+  number: 2
+
+requirements:
+  build:
+    - make
+    - {{ compiler('c') }}
+    - {{ compiler('cxx') }}
+  host:
+    - isa-l
+    - libdeflate
+  run:
+    - isa-l
+    - libdeflate
+
+test:
+  commands:
+    - fastp --help
+
+about:
+  home: https://github.com/OpenGene/fastp
+  license: MIT
+  license_family: MIT
+  license_file: LICENSE
+  summary: A ultra-fast FASTQ preprocessor with full features (QC/adapters/trimming/filtering/splitting...)