Add docker_arm64 and singluarity_arm64 profiles to nextflow.config

seqeralabs · Jun 19, 2024 · a019b6b · a019b6b
1 parent 8a55332
commit a019b6b
Showing 1 changed file with 20 additions and 0 deletions.
diff --git a/nextflow.config b/nextflow.config
@@ -99,6 +99,16 @@ profiles {
         apptainer.enabled       = false
         docker.runOptions       = '-u $(id -u):$(id -g)'
     }
+    docker_arm64 { // Identical to above, but used by Seqera Containers config files at module level
+        docker.enabled          = true
+        conda.enabled           = false
+        singularity.enabled     = false
+        podman.enabled          = false
+        shifter.enabled         = false
+        charliecloud.enabled    = false
+        apptainer.enabled       = false
+        docker.runOptions       = '-u $(id -u):$(id -g)'
+    }
     arm {
         process.arch            = 'linux/arm64'
     }
@@ -112,6 +122,16 @@ profiles {
         charliecloud.enabled    = false
         apptainer.enabled       = false
     }
+    singularity_arm64 { // Identical to above, but used by Seqera Containers config files at module level
+        singularity.enabled     = true
+        singularity.autoMounts  = true
+        conda.enabled           = false
+        docker.enabled          = false
+        podman.enabled          = false
+        shifter.enabled         = false
+        charliecloud.enabled    = false
+        apptainer.enabled       = false
+    }
     podman {
         podman.enabled          = true
         conda.enabled           = false