API reference: Main V0.2a

Introduction

This is the API reference to the Aligner main programme (src/aligner.py).

The description here is of main version 0.2a.

Options

Run

> python aligner.py -h

To see all options.

Dataset formats

The descriptions of file formats supported by this version are here.

Individual modules

• Alignment Data Format (V0.2a)

• Dataset Data Format (V0.1a)

• FileIO, File Format (V0.2a)

• API for Alignment Models (V0.2a)