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Read, process and visualize tractography data on web (Neuroglancer) using Typescript

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shrutivarade/Neuroglancer-Tractography

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Neuroglancer-Tractography (.trk file reader in TypeScript)

This project is used to:

  • Read .trk data using TypeScript.
  • Convert .trk files to streamline data in the form of skeletons.
  • Visualize the data in Neuroglancer.

Graphics

Track Visualization Track Visualization Track Visualization

Data

Nifti: https://dandiarchive.s3.amazonaws.com/blobs/3de/a2d/3dea2d82-8af8-434f-b7a9-60a21d891985

Trk: https://dandiarchive.s3.amazonaws.com/blobs/d4a/c43/d4ac43bd-6896-4adf-a911-82edbea21f67

Video Demo

(https://github.com/shrutivarade/Neuroglancer-Tractography/blob/main/src/gfx/Tract_viz_demo.mov)

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Read, process and visualize tractography data on web (Neuroglancer) using Typescript

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