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SIB Swiss Institute of Bioinformatics

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  1. training-collection training-collection Public

    Collection of bioinformatics training materials

    Python 1k 183

  2. single-cell-training single-cell-training Public

    SIB course on single cell transcriptomics by mostly using the Seurat pipeline

    R 82 36

  3. intermediate-python-training intermediate-python-training Public

    Jupyter Notebook 66 29

  4. first-steps-with-python-training first-steps-with-python-training Public

    repository of the 3-day course "First steps with Python in Life Sciences" from SIB-training

    Jupyter Notebook 59 17

  5. intro-machine-learning-training intro-machine-learning-training Public

    Jupyter Notebook 46 15

  6. first-steps-with-R-training first-steps-with-R-training Public

    repository of the 2-day course "First steps with R in Life Sciences" from SIB-training

    R 46 12

Repositories

Showing 10 of 127 repositories
  • training-collection Public

    Collection of bioinformatics training materials

    sib-swiss/training-collection’s past year of commit activity
    Python 1,016 183 1 0 Updated Apr 6, 2025
  • single-cell-python-training Public
    sib-swiss/single-cell-python-training’s past year of commit activity
    HTML 3 CC-BY-4.0 0 0 0 Updated Apr 6, 2025
  • spatial-transcriptomics-training Public
    sib-swiss/spatial-transcriptomics-training’s past year of commit activity
    R 2 CC-BY-4.0 1 1 0 Updated Apr 6, 2025
  • glittr-stats Public

    General statistics of Glittr.org. Comes with the manuscript.

    sib-swiss/glittr-stats’s past year of commit activity
    PostScript 1 0 0 0 Updated Apr 6, 2025
  • cancer-variants-training Public
    sib-swiss/cancer-variants-training’s past year of commit activity
    Lua 5 CC-BY-4.0 2 0 0 Updated Apr 6, 2025
  • sparql-examples-utils Public Forked from sib-swiss/sparql-examples

    A tool to maintain and test your SPARQL examples

    sib-swiss/sparql-examples-utils’s past year of commit activity
    Java 5 17 13 2 Updated Apr 5, 2025
  • sparql-llm Public

    🦜✨ Chat system and reusable components to improve LLMs capabilities when generating SPARQL queries

    sib-swiss/sparql-llm’s past year of commit activity
    Jupyter Notebook 30 MIT 3 2 0 Updated Apr 5, 2025
  • boxshade Public archive

    Boxshade is a program for creating good looking printouts from multiple- aligned protein or DNA sequences

    sib-swiss/boxshade’s past year of commit activity
    C 0 0 0 0 Updated Apr 4, 2025
  • sequencing-data-analysis-training Public

    SIB course that introduces analysis of NGS data

    sib-swiss/sequencing-data-analysis-training’s past year of commit activity
    Shell 16 CC-BY-4.0 12 4 0 Updated Apr 4, 2025
  • CAS-UNIL-intro-to-unix Public

    Introduction to Linux / UNIX and the Bash shell - UNIL CAS in data stewardship

    sib-swiss/CAS-UNIL-intro-to-unix’s past year of commit activity
    0 0 0 0 Updated Apr 1, 2025
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