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SlicerANTs

This extension implements ANTs Registration into Slicer

Dev

CDash: SlicerPreview

Instalation

Install from the Slicer Extension Manager.

Modules

• antsRegistration: provides an interface for doing registration with ANTs. Generates parameters passed to the antsRegistrationCLI module.
• antsRegistrationCLI: cli module that runs the command generated from antsRegistration module.

(Basic) Tutorial

• Load volumes to register (for example MRBrainTumor1 and MRBrainTumor2 from Sample Data module)
• Set MRBrainTumor1 in the fixed image selector, MRBrainTumor2 in the moving image selector and select Rigid from the Stages (Presets).
• Choose a Transformed Volume to specify the output
• Click the Run Registration button and wait for the registration to finish.

Example

The following is an example CT to MR rigid registration.

Pre

Post

References

• ANTs
• Slicer