Automated deployment to update containers 2024-05-01

singularityhub · May 1, 2024 · de7dc63 · de7dc63
1 parent 8cba505
commit de7dc63
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Showing 15 changed files with 35 additions and 20 deletions.
diff --git a/quay.io/biocontainers/abpoa/container.yaml b/quay.io/biocontainers/abpoa/container.yaml
@@ -2,13 +2,14 @@ url: https://biocontainers.pro/tools/abpoa
 maintainer: '@vsoch'
 description: shpc-registry automated BioContainers addition for abpoa
 latest:
-  1.5.1--he4a0461_0: sha256:8d1290119026abc4d8a9adf1ecb3f644da51f32554c786735fafddf2aea5322d
+  1.5.1--he4a0461_1: sha256:a96f35644dc8e8b468f68bfb6c7bc7fc8c36f5e8fbaa2f8231210b6fcea0efb3
 tags:
   1.4.1--h7132678_1: sha256:5648a89bda11703b9419176b17ae7858465dfe9261444a15a7fb65d5a895945d
   1.4.1--h7132678_2: sha256:c0b499af682159c7aa76b6fe79055c6bbe66d7a79aeac679eaae7cef15d9b1f4
   1.4.1--he4a0461_4: sha256:89c787fbf4c610eb058f0f480986e1c3cdb6d95e35088361b265e03ae8c2d6f0
   1.4.3--he4a0461_0: sha256:3e694e716ff2d1211f501057e01ca9f19f24e3bb0557ea45c5cacc2243abf8ed
   1.5.1--he4a0461_0: sha256:8d1290119026abc4d8a9adf1ecb3f644da51f32554c786735fafddf2aea5322d
+  1.5.1--he4a0461_1: sha256:a96f35644dc8e8b468f68bfb6c7bc7fc8c36f5e8fbaa2f8231210b6fcea0efb3
 docker: quay.io/biocontainers/abpoa
 aliases:
   abpoa: /usr/local/bin/abpoa
diff --git a/quay.io/biocontainers/chewbbaca/container.yaml b/quay.io/biocontainers/chewbbaca/container.yaml
@@ -2,7 +2,7 @@ url: https://biocontainers.pro/tools/chewbbaca
 maintainer: '@vsoch'
 description: shpc-registry automated BioContainers addition for chewbbaca
 latest:
-  3.3.4--pyhdfd78af_0: sha256:b7528c759e4daf7093f2ef9023689c662c5ee51dfd332138f357ea8519e8d972
+  3.3.5--pyhdfd78af_0: sha256:e5ed8306d05fddb62d22261c195ca44c78744be6e227301e79de1bc627585a21
 tags:
   2.8.5--pyhdfd78af_0: sha256:3c32318871e17ad1e6b4b0d38085fb6ca25e250ced5721798705944d8fc3c9a0
   3.0.0--pyhdfd78af_0: sha256:293aba861b02baa4bfef96577bc3e10a71381acdefc4117d3f6682ef71304aab
@@ -15,6 +15,7 @@ tags:
   3.3.2--pyhdfd78af_0: sha256:56f1c2fdc0b5704601ccf5a98178b76efe5746c2de2a8dd769744f0799c5029b
   3.3.3--pyhdfd78af_0: sha256:8f555edfc02c2bc471447abcf704c31f26c6fbc706543d15d6d95de4f56ce4b0
   3.3.4--pyhdfd78af_0: sha256:b7528c759e4daf7093f2ef9023689c662c5ee51dfd332138f357ea8519e8d972
+  3.3.5--pyhdfd78af_0: sha256:e5ed8306d05fddb62d22261c195ca44c78744be6e227301e79de1bc627585a21
 docker: quay.io/biocontainers/chewbbaca
 aliases:
   chewBBACA.py: /usr/local/bin/chewBBACA.py

diff --git a/quay.io/biocontainers/clair3-illumina/container.yaml b/quay.io/biocontainers/clair3-illumina/container.yaml
@@ -2,7 +2,7 @@ url: https://biocontainers.pro/tools/clair3-illumina
 maintainer: '@vsoch'
 description: singularity registry hpc automated addition for clair3-illumina
 latest:
-  1.0.6--h376f1d3_0: sha256:8445e02960f4bfcc84e7ffd2e90230cfdfea1922db10f8524621af5f24740d5b
+  1.0.8--h376f1d3_0: sha256:e0c6daded5a2047891da1ff00de9501cdf625f363811fa1e91cacefff9826a4b
 tags:
   0.1.5--h2df963e_1: sha256:2afff90b40c83cfb538d4d13623e428bce6bc806d3a5ec98ceaa92d2207cc998
   1.0.0--h2df963e_0: sha256:1af2c9a7bad9470fda6c743ecd73d801a944f578d602f870fc20a634823745df
@@ -12,6 +12,7 @@ tags:
   1.0.4--h376f1d3_0: sha256:69f9c6c2a6862db96ac6f611174a82951c9338d2bc623bb6d01b188be1b042af
   1.0.5--h376f1d3_0: sha256:ad6c7f4e31f54989ab739b56e374a4c50a4dbf028ae5d6c3545f935f3c86e01d
   1.0.6--h376f1d3_0: sha256:8445e02960f4bfcc84e7ffd2e90230cfdfea1922db10f8524621af5f24740d5b
+  1.0.8--h376f1d3_0: sha256:e0c6daded5a2047891da1ff00de9501cdf625f363811fa1e91cacefff9826a4b
 docker: quay.io/biocontainers/clair3-illumina
 aliases:
   clair3.py: /usr/local/bin/clair3.py

diff --git a/quay.io/biocontainers/deeptoolsintervals/container.yaml b/quay.io/biocontainers/deeptoolsintervals/container.yaml
@@ -2,13 +2,14 @@ url: https://biocontainers.pro/tools/deeptoolsintervals
 maintainer: '@vsoch'
 description: shpc-registry automated BioContainers addition for deeptoolsintervals
 latest:
-  0.1.9--py310h8472f5a_7: sha256:f80da71c8c20df74fa3f33c11a0803c94662d7d0d2c9e37ce41d51bd866e4d74
+  0.1.9--py38h4c6a040_8: sha256:1b84468e617d594316114d2b5cc13f4fd3d0e755ef583f415444234347745eb5
 tags:
   0.1.9--py27h9801fc8_4: sha256:903220a951714054dd1d2386e794cef191ecac6b2cdd0446f30d746e00661642
   0.1.9--py39h87d955d_5: sha256:0545250d5a69f037a832a3b187470aa59df2681a6b7c239aec8ad411106d41f3
   0.1.9--py310h8472f5a_6: sha256:97262820c3446fe70596e4ad1f916bd73e31ef9a7b09d739d9d989e6e60e2bb5
   0.1.9--py310h8472f5a_7: sha256:f80da71c8c20df74fa3f33c11a0803c94662d7d0d2c9e37ce41d51bd866e4d74
   0.1.9--py39h87d955d_7: sha256:24ef8a946d45e3a5c2ac163f7a5f44cd2038c7941fc18b8e05e924bcd722a79a
+  0.1.9--py38h4c6a040_8: sha256:1b84468e617d594316114d2b5cc13f4fd3d0e755ef583f415444234347745eb5
 docker: quay.io/biocontainers/deeptoolsintervals
 aliases:
   python2-config: /usr/local/bin/python2-config

diff --git a/quay.io/biocontainers/fgsv/container.yaml b/quay.io/biocontainers/fgsv/container.yaml
@@ -2,11 +2,12 @@ url: https://biocontainers.pro/tools/fgsv
 maintainer: '@vsoch'
 description: singularity registry hpc automated addition for fgsv
 latest:
-  0.1.1--hdfd78af_0: sha256:16e77d00558bbd86f9ef6337f715866b7d1a327375fc1ffda9a9ee34bba46808
+  0.2.0--hdfd78af_0: sha256:a0a73d3e5067298390aabc0801e9b0fdbb13b6bdee3c0ab60432c8e324b941f2
 tags:
   0.0.1--hdfd78af_0: sha256:efd75f9d53cf443072f04ac27d502746e139c2b12a77cca728ba65c83995a7d8
   0.0.2--hdfd78af_0: sha256:8c909b2c768ae38e2208108c61aebdd047d5fb54e24d6c199d5442e4dbb48468
   0.1.1--hdfd78af_0: sha256:16e77d00558bbd86f9ef6337f715866b7d1a327375fc1ffda9a9ee34bba46808
+  0.2.0--hdfd78af_0: sha256:a0a73d3e5067298390aabc0801e9b0fdbb13b6bdee3c0ab60432c8e324b941f2
 docker: quay.io/biocontainers/fgsv
 aliases:
   fgsv: /usr/local/bin/fgsv

diff --git a/quay.io/biocontainers/gtdbtk/container.yaml b/quay.io/biocontainers/gtdbtk/container.yaml
@@ -2,13 +2,14 @@ url: https://biocontainers.pro/tools/gtdbtk
 maintainer: '@vsoch'
 description: shpc-registry automated BioContainers addition for gtdbtk
 latest:
-  2.3.2--pyhdfd78af_0: sha256:7bf2afebb6899138b313133995269aa3fc1df4a9ec9aa019577aa98bc66ab517
+  2.4.0--pyhdfd78af_1: sha256:c2de30bd02c2be74e607ce3ca98ad1bd88a1eafaa0c805f507efd77171f8e5d7
 tags:
   2.1.1--pyhdfd78af_1: sha256:8a3f3b4416fb8c01f7c3c73cb05309c6b85d81a9028f8db8f9ef783e72c63bcb
   2.2.4--pyhdfd78af_0: sha256:d764fd7c96a5432ba0cd6f0a26f95eded43bf4ede59f9d07ddd2e8b9c5b1e33a
   2.2.5--pyhdfd78af_0: sha256:b80d22d8e73b4fdc78421a7c079f32071c4f08bbf444b8b1ee29622b6d8e394b
   2.3.2--pyhdfd78af_0: sha256:7bf2afebb6899138b313133995269aa3fc1df4a9ec9aa019577aa98bc66ab517
   2.2.6--pyhdfd78af_1: sha256:a00fe47cbc1a74026fb2506bdd92c35153a4929e8c61dfb52d5739536f6564a6
+  2.4.0--pyhdfd78af_1: sha256:c2de30bd02c2be74e607ce3ca98ad1bd88a1eafaa0c805f507efd77171f8e5d7
 docker: quay.io/biocontainers/gtdbtk
 aliases:
   download-db.sh: /usr/local/bin/download-db.sh

diff --git a/quay.io/biocontainers/hybracter/container.yaml b/quay.io/biocontainers/hybracter/container.yaml
@@ -2,7 +2,7 @@ url: https://biocontainers.pro/tools/hybracter
 maintainer: '@vsoch'
 description: singularity registry hpc automated addition for hybracter
 latest:
-  0.7.1--pyhdfd78af_0: sha256:1fda8c6e32e66d58c2d3995c2981ea7b3527747f01ba0cc54b2d6fb3be1ca460
+  0.7.3--pyhdfd78af_0: sha256:ed62495748bb5bead56f7aa3cb368328caa5c1186ff647cfa3b31499c1e38c16
 tags:
   0.1.2--pyhdfd78af_0: sha256:980cfcbbad71ce1742a56685146167b3b32b3df12e14d8a05d5346eb0a5a2c12
   0.2.1--pyhdfd78af_0: sha256:b76818af984f2d2c1795b9a6e62ff32a02eb88dbbd345f2e191f56e3b463f8ea
@@ -11,6 +11,7 @@ tags:
   0.6.0--pyhdfd78af_0: sha256:23cf68f12330aafccb6db79414037e346f94dce628edb55720d49c6ea65f3e15
   0.5.0--pyhdfd78af_0: sha256:2f1e63e1002e76dfc12c12d164fad53d6f1abb8bec980a6631800185e4f731f5
   0.7.1--pyhdfd78af_0: sha256:1fda8c6e32e66d58c2d3995c2981ea7b3527747f01ba0cc54b2d6fb3be1ca460
+  0.7.3--pyhdfd78af_0: sha256:ed62495748bb5bead56f7aa3cb368328caa5c1186ff647cfa3b31499c1e38c16
 docker: quay.io/biocontainers/hybracter
 aliases:
   hybracter: /usr/local/bin/hybracter

diff --git a/quay.io/biocontainers/hyphy/container.yaml b/quay.io/biocontainers/hyphy/container.yaml
@@ -2,9 +2,10 @@ url: https://biocontainers.pro/tools/hyphy
 maintainer: '@vsoch'
 description: shpc-registry automated BioContainers addition for hyphy
 latest:
-  2.5.60--h0705fce_0: sha256:b670b6db8c9eca3d1ff98cfe570b2be953c7bfa2de0abbfb10638d6a16ff9dc3
+  2.5.61--h0705fce_0: sha256:8e61391e27896771fee920c536a432afb3082a088256388f0f8c57a149276505
 tags:
   2.5.9--ha076c6e_0: sha256:a84936a03479d9782d991344e44db9539804065e04d9c6850ae911c068b723d3
   2.5.38--h91ae1e9_0: sha256:9f943f4c5c10e4017da77ede652df4b920858fcdc9926a077b426b4fbad18d2a
   2.5.60--h0705fce_0: sha256:b670b6db8c9eca3d1ff98cfe570b2be953c7bfa2de0abbfb10638d6a16ff9dc3
+  2.5.61--h0705fce_0: sha256:8e61391e27896771fee920c536a432afb3082a088256388f0f8c57a149276505
 docker: quay.io/biocontainers/hyphy
diff --git a/quay.io/biocontainers/matchms/container.yaml b/quay.io/biocontainers/matchms/container.yaml
@@ -2,7 +2,7 @@ url: https://biocontainers.pro/tools/matchms
 maintainer: '@vsoch'
 description: shpc-registry automated BioContainers addition for matchms
 latest:
-  0.24.2--pyhdfd78af_0: sha256:381beb8f3a9b772df8608d9dc81228596006f55d1ce75f661e1d571b494fbf69
+  0.24.4--pyhdfd78af_0: sha256:90749df13c1d96a0da55be7cd49881ce45e698fd820758c9f6780b7ae3077f70
 tags:
   0.9.2--pyh5e36f6f_0: sha256:d1a8f1d785b8993724305e4684caae5bc194b9fbb99053883eacfead753f20c0
   0.17.0--pyh7cba7a3_0: sha256:e627c7edc52623413aaaa9a8e0d5ab36745a674a134fc9068ebfca9c2b64fef4
@@ -20,6 +20,7 @@ tags:
   0.24.0--pyhdfd78af_1: sha256:4026ba35c70e292ba6981767aa86bd6899ae8cd623df7586a7875b8805382bf0
   0.24.1--pyhdfd78af_0: sha256:fe3473d65240212621445b10237715a2e0d4f12b66c437540d601e8453044c7d
   0.24.2--pyhdfd78af_0: sha256:381beb8f3a9b772df8608d9dc81228596006f55d1ce75f661e1d571b494fbf69
+  0.24.4--pyhdfd78af_0: sha256:90749df13c1d96a0da55be7cd49881ce45e698fd820758c9f6780b7ae3077f70
 docker: quay.io/biocontainers/matchms
 aliases:
   numba: /usr/local/bin/numba

diff --git a/quay.io/biocontainers/pychopper/container.yaml b/quay.io/biocontainers/pychopper/container.yaml
@@ -2,9 +2,10 @@ url: https://biocontainers.pro/tools/pychopper
 maintainer: '@vsoch'
 description: shpc-registry automated BioContainers addition for pychopper
 latest:
-  2.5.0--py_0: sha256:d0a9dcd71a609d2d979647af5c36ce33fe63ceb09674266029d7f1b67d994b96
+  2.7.9--pyhdfd78af_0: sha256:51656537fbb0860ff16e8860c38b8357c8d27e623f63364c8c2d006abc5e88d2
 tags:
   2.5.0--py_0: sha256:d0a9dcd71a609d2d979647af5c36ce33fe63ceb09674266029d7f1b67d994b96
+  2.7.9--pyhdfd78af_0: sha256:51656537fbb0860ff16e8860c38b8357c8d27e623f63364c8c2d006abc5e88d2
 docker: quay.io/biocontainers/pychopper
 aliases:
   cdna_classifier.py: /usr/local/bin/cdna_classifier.py

diff --git a/quay.io/biocontainers/rtk2/container.yaml b/quay.io/biocontainers/rtk2/container.yaml
@@ -2,9 +2,10 @@ url: https://biocontainers.pro/tools/rtk2
 maintainer: '@vsoch'
 description: singularity registry hpc automated addition for rtk2
 latest:
-  2.10--hdcf5f25_0: sha256:4f9ac7d7405bc53f0b5f65911ceccd2f2c35b0e513d81f44afc1ab532a8db260
+  2.11.2--hdcf5f25_0: sha256:0ce524a705af598d751ad38dd43a3654f0b9e4ab7c724db0dd10eaeb92ce9b80
 tags:
   2.10--hdcf5f25_0: sha256:4f9ac7d7405bc53f0b5f65911ceccd2f2c35b0e513d81f44afc1ab532a8db260
+  2.11.2--hdcf5f25_0: sha256:0ce524a705af598d751ad38dd43a3654f0b9e4ab7c724db0dd10eaeb92ce9b80
 docker: quay.io/biocontainers/rtk2
 aliases:
   rtk2: /usr/local/bin/rtk2
diff --git a/quay.io/biocontainers/sequenoscope/container.yaml b/quay.io/biocontainers/sequenoscope/container.yaml
@@ -2,9 +2,10 @@ url: https://biocontainers.pro/tools/sequenoscope
 maintainer: '@vsoch'
 description: singularity registry hpc automated addition for sequenoscope
 latest:
-  0.0.5--pyh7cba7a3_0: sha256:78fd850af42577b549f05d76ac11f010bdabfbcce60c8cbb4a5ce98966c3ae29
+  0.0.5--pyh7cba7a3_1: sha256:fe77f9906c0a62ed4dc32e7fe15613828fe97bf4d7254a37ae8b5b510132fa78
 tags:
   0.0.5--pyh7cba7a3_0: sha256:78fd850af42577b549f05d76ac11f010bdabfbcce60c8cbb4a5ce98966c3ae29
+  0.0.5--pyh7cba7a3_1: sha256:fe77f9906c0a62ed4dc32e7fe15613828fe97bf4d7254a37ae8b5b510132fa78
 docker: quay.io/biocontainers/sequenoscope
 aliases:
   sequenoscope: /usr/local/bin/sequenoscope

diff --git a/quay.io/biocontainers/snakemake-interface-executor-plugins/container.yaml b/quay.io/biocontainers/snakemake-interface-executor-plugins/container.yaml
@@ -2,7 +2,7 @@ url: https://biocontainers.pro/tools/snakemake-interface-executor-plugins
 maintainer: '@vsoch'
 description: singularity registry hpc automated addition for snakemake-interface-executor-plugins
 latest:
-  9.1.0--pyhdfd78af_0: sha256:cbdad0dc888ef68d0e71308aeba6acdd1a9b9c830b3144afc4b163cfcdf2a90d
+  9.1.1--pyhdfd78af_0: sha256:3508343366bd324cf21d716c166d69d3a21a0091b050ef8fce476334cd79afd8
 tags:
   1.0.1--pyhdfd78af_0: sha256:8b8ed1c92656a706fc8386caea18f534de39fa8bb504e785ecfe97971cace5c3
   5.0.2--pyhdfd78af_0: sha256:1ad0280b34f79c258d0868dd38f2675eb76972a86e57949c69c56e168f9ab8d7
@@ -18,6 +18,7 @@ tags:
   8.2.0--pyhdfd78af_0: sha256:27e4a179e53f0d986ad6b63927d9ac3b7de3ea0abd77eb2af006baded72e87f1
   9.1.0--pyhdfd78af_0: sha256:cbdad0dc888ef68d0e71308aeba6acdd1a9b9c830b3144afc4b163cfcdf2a90d
   9.0.2--pyhdfd78af_0: sha256:d9b8012f6afa97978e48bb83364fc0323a41cc51b0ccef5055b69d1d35ddd44c
+  9.1.1--pyhdfd78af_0: sha256:3508343366bd324cf21d716c166d69d3a21a0091b050ef8fce476334cd79afd8
 docker: quay.io/biocontainers/snakemake-interface-executor-plugins
 aliases:
   2to3-3.11: /usr/local/bin/2to3-3.11

diff --git a/quay.io/biocontainers/snakemake-storage-plugin-gcs/container.yaml b/quay.io/biocontainers/snakemake-storage-plugin-gcs/container.yaml
@@ -2,10 +2,11 @@ url: https://biocontainers.pro/tools/snakemake-storage-plugin-gcs
 maintainer: '@vsoch'
 description: singularity registry hpc automated addition for snakemake-storage-plugin-gcs
 latest:
-  0.1.4--pyhdfd78af_0: sha256:cbf27cdec6e2cca45c2d0042d662c03fd1f1e71301c5dbd486c3ed6052ee9bec
+  1.0.0--pyhdfd78af_0: sha256:142b8ffb456c00b046eda2208523b50dcc0d74954681c317b8343e304bc506b8
 tags:
   0.1.3--pyhdfd78af_0: sha256:54ce99bec39b26e088df29176519f677971eae61d26e71cc4d2624e2df205f10
   0.1.4--pyhdfd78af_0: sha256:cbf27cdec6e2cca45c2d0042d662c03fd1f1e71301c5dbd486c3ed6052ee9bec
+  1.0.0--pyhdfd78af_0: sha256:142b8ffb456c00b046eda2208523b50dcc0d74954681c317b8343e304bc506b8
 docker: quay.io/biocontainers/snakemake-storage-plugin-gcs
 aliases:
   protoc-24.4.0: /usr/local/bin/protoc-24.4.0

diff --git a/rocker/shiny/container.yaml b/rocker/shiny/container.yaml
@@ -3,17 +3,18 @@ url: https://hub.docker.com/r/rocker/shiny
 maintainer: '@vsoch'
 description: Docker image with R + Shiny.
 latest:
-  4.3.3: sha256:6ca7c744cdeb1e92bd02b4bf440eeb2da9856af7a7e8bc1bf26a1a3035841ade
+  4.4.0: sha256:b8636e53347cd94c007e708e50d38bb5e7c8ebf81b40f9a06a9f858d7b4d8b0f
 tags:
   4.2.2: sha256:5a01f59096c1b86e283cf9756d8badf8f1760a565b82b0c02112f7ffabb81b8b
   3.6.3: sha256:212182dd244edd0380f2f76521f2c10405504b632696852d776402585eb68625
   4.1.3: sha256:2e13901182cd775624431cfb906c3b0c90eee1b824a102a213cc3f136dcbb9fa
   4.0.5: sha256:4e68438dc5a553b440e148ba04832007a6949361c4c9796c042599a7b2444285
-  4.2.3: sha256:fabaf2857be7b90d574253b0e6d930229d9a0cfe59c711624dc44fc11f2b43b1
-  4.3.0: sha256:2e798db9b2765e6a8ee6726ff869780a3c931f8b33ff401f4e7273c7c18dbfac
-  4.3.1: sha256:32c51f1ee5e1e2d6e14fd56ace923f77ecb9b254d9b2bce4e342a5856223e5ca
-  4.3.2: sha256:7acc2720c95ea42f17bc08c444402b7acf4d1e5aa2c6ebd2c0e74a5004477cb9
-  4.3.3: sha256:6ca7c744cdeb1e92bd02b4bf440eeb2da9856af7a7e8bc1bf26a1a3035841ade
+  4.2.3: sha256:70fa9473de1c98d2f4e5393af76733db3a7e7f5d813664dda58b143d78a34dd5
+  4.3.0: sha256:15990f645e367bc020233dc6b4f929f98c22c2fb5a5413a294e14d5cd1fe3d38
+  4.3.1: sha256:c917230d2ebcae772ffae1192e06ba04125a6b512071d9c36d8e7155d4c8667a
+  4.3.2: sha256:882ffd767bc97fa310da50137f7539f548978a354b5e9d1e87b0f6741b81a44b
+  4.3.3: sha256:e74bb28c4da57a075a62aaefc4cddd1a4bd332ac5e07f3ae0a6c6c61facc4ccd
+  4.4.0: sha256:b8636e53347cd94c007e708e50d38bb5e7c8ebf81b40f9a06a9f858d7b4d8b0f
 filter:
 - ^[0-9]+[.][0-9]+[.][0-9]+$
 aliases: