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1. LINE_1_RACE_seq_analysis LINE_1_RACE_seq_analysis Public

   Scripts and data used during the analysis of LINE-1 RACE seq tail-seq output, for the publication "Uridilation by TUT4/7 restricts retrotransposition of human LINE-1"s (Warkocki et al 2018, Cell, a…

   R 5 2

2. PlasFlow PlasFlow Public

   Software for prediction of plasmid sequences in metagenomic assemblies

   Python 105 28

3. nanotail nanotail Public

   R package for visualization and exploratory analysis of Oxford Nanopore direct RNA seq based polyA predictions

   R 11 5

4. LRB-IIMCB/DTW_mRNA-1273 LRB-IIMCB/DTW_mRNA-1273 Public

   Dynamic Time Warping functions used for the identification of mRNA-1273 reads in the nanopore DRS raw sequencing data

   Python 1 2

5. LRB-IIMCB/yeast_deadenylation_methods_chapter LRB-IIMCB/yeast_deadenylation_methods_chapter Public

   Transcriptome-wide analysis of mRNA adenylation status in yeast using nanopore sequencing - materials accompanying the methods chapter

   TeX