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Process new ETL gpt tables into symptom lists #135

Process new ETL gpt tables into symptom lists

Process new ETL gpt tables into symptom lists #135

Workflow file for this run

name: CI
on: [push]
jobs:
unittest:
name: unit tests
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- name: Set up Python
uses: actions/setup-python@v5
with:
python-version: "3.11"
- name: Install dependencies
run: |
python -m pip install --upgrade pip
pip install .[tests]
- name: Test with pytest
run: python -m pytest
lint:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- name: Set up Python
uses: actions/setup-python@v5
with:
python-version: "3.11"
- name: Get library from main
run: pip install git+https://github.com/smart-on-fhir/cumulus-library.git
- name: Install linters
run: |
python -m pip install --upgrade pip
pip install ".[dev]"
- name: Run sqlfluff on jinja templates
run: |
sqlfluff lint
- name: Run ruff
if: success() || failure() # still run ruff if above checks fails
run: |
ruff check
ruff format --check