fix: getting cpus_per_task from resources, correctly

snakemake · Apr 4, 2024 · cd27a58 · cd27a58
1 parent c9b10a7
commit cd27a58
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/snakemake_executor_plugin_slurm_jobstep/__init__.py b/snakemake_executor_plugin_slurm_jobstep/__init__.py
@@ -116,7 +116,7 @@ def run_job(self, job: JobExecutorInterface):
             # has set the resources correctly.
 
             call = "srun -n1 --cpu-bind=q "
-            call += f"--cpus-per-task {job.resources.cpus_per_task} "
+            call += f"--cpus-per-task {job.resources.get('cpus_per_task')} "
             call += f"{self.format_job_exec(job)}"
 
         self.logger.debug(job.is_group())