feat: Add a wrapper for quarto markdown rendering#3003

Open

votti wants to merge 21 commits intosnakemake:masterfrom FroeseLab:feature/quarto

+1,234-3

Commits on Jun 20, 2024

Add a wrapper for quarto markdown rendering
Vito Zanotelli
committed
docs: small corrections
Vito Zanotelli
committed
doc: improve documentation
Vito Zanotelli
committed

Commits on Jun 21, 2024

doc: improve documentation
Vito Zanotelli
committed
Remove renv dependencies from conda env
Vito Zanotelli
committed
Fix meta.yml rendering errors
Vito Zanotelli
committed
Add tests for quarto wrapper
Vito Zanotelli
committed
Pin quarto version
Vito Zanotelli
committed
Pin the versions in the test environments
Vito Zanotelli
committed
Fix wrong folder for quarto tests
Vito Zanotelli
committed
Fix test refering to ../environment.yml
Vito Zanotelli
committed

Commits on Jun 22, 2024

Remove the conda r-dependency example
Vito Zanotelli
committed
Merge branch 'master' into feature/quarto
votti
authored
Handle case where not log file defined
Vito Zanotelli
committed

Commits on Jun 24, 2024

Add Quarto url

votti
and
fgvieira
authored

Commits on Jun 27, 2024

Merge branch 'master' into feature/quarto
votti
authored

Commits on Jul 23, 2024

Merge branch 'master' into feature/quarto
votti
authored
Add tests for resource passing
Vito Zanotelli
committed
Automatically pass resources if named resources_
Vito Zanotelli
committed

Commits on Jul 29, 2024

Add missing notes section
Vito Zanotelli
committed

Commits on Jul 30, 2024

Fix error quarto has no params
Vito Zanotelli
committed