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Some updates and bug fixes #761
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Commits on Jul 30, 2024
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feat: support coercing from XcmsExperiment to XCMSnExp
- Support coercing from `XcmsExperiment` to `XCMSnExp` using `setAs(object, "XCMSnExp")` (issue #752).
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Commits on Jul 31, 2024
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refactor: change estimatePrecursorIntensity to a function
- Change `estimatePrecursorIntensity()` to a method and add an implementation for `MsExperiment`.
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Commits on Aug 1, 2024
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Commits on Aug 5, 2024
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Commits on Aug 6, 2024
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- `chromatogram` with `msLevel = 2L` does by default extract chromatographic data of all MS2 spectra, independently of whether different m/z isolation windows were used. For data with isolation windows, the respective isolation window can be set/defined with the `isolationWindowTargetMz` parameter. - Update documentation to describe this behaviour better.
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Commits on Aug 9, 2024
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