Tutorial index - Change to use a table

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snowex-hackweek · jomey · Sep 25, 2024 · Aug 30, 2024 · Aug 30, 2024 · Sep 19, 2024
commit 3e341af25146600e6a64dc6619f1dfc213a31831
diff --git a/book/tutorials/index.md b/book/tutorials/index.md
@@ -4,5 +4,16 @@
 
 Below you'll find a list of all tutorials presented at this event:
 
-```{tableofcontents}
-```
+| Tutorial                                                                                     |
+|----------------------------------------------------------------------------------------------|
+| [Mission Overview](https://docs.google.com/presentation/d/1mVkyBy8LxmcKe6Idcs1ruapH_AqhpJ1v) |
+| [Data Overview](snowex-core/index)                                                           |
+| [Data Accesss](Data_access/index)                                                            |
+| [Introduction to the SnowEx Database](snowex_database/index)                                 |
+| [SWESARR](swesarr/index)                                                                     |
+| [GPR and Lidar](gpr_lidar/GPR_Lidar_HackweekTutorial.ipynb)                                        |
+| [Neural Networks with PyTorch](NN_with_Pytorch/intro)                                        |
+| [From notebooks to packages](https://icesat-2-2024.hackweek.io/tutorials/nb-to-package/index.html)                                                               |
+| [Putting open science into practice](https://icesat-2-2024.hackweek.io/tutorials/open-science/index.html)                                                       |
+| [Mental Health in the Geosciences](https://icesat-2-2024.hackweek.io/tutorials/mental-health/index.html)                                                         |
+| -------------------------------------                                                        |
diff --git a/CODE_OF_CONDUCT.md b/CODE_OF_CONDUCT.md
 We as members, contributors, and leaders pledge to make participation in our
 community a harassment-free experience for everyone, regardless of age, body
 size, visible or invisible disability, ethnicity, sex characteristics, gender
 identity and expression, level of experience, education, socio-economic status,
 nationality, personal appearance, race, religion, or sexual identity
 and orientation.

diff --git a/book/tutorials/gpr_lidar/GPR_Lidar_HackweekTutorial.ipynb b/book/tutorials/gpr_lidar/GPR_Lidar_HackweekTutorial.ipynb
    "#site3 = LayerMeasurements.from_filter(date=dt3, site_name='Fairbanks', site_id='FLCF', limit=1)\n",
    "#site4 = LayerMeasurements.from_filter(date=dt4, site_name='Fairbanks', site_id='FLCF', limit=1)\n",
    "\n",
    "#Use pandas ot read in csv data\n",
    "#gpr_df_dt1 = PointMeasurements.from_area(pt=site1.geometry[0], crs=26906, buffer=10000,\n",
    "#    type='two_way_travel',\n",
    "#    observers='Randall Bonnell',\n",
diff --git a/book/tutorials/NN_with_Pytorch/04_Building_And_Training_FFN.ipynb b/book/tutorials/NN_with_Pytorch/04_Building_And_Training_FFN.ipynb
    "## Acknowledgements\n",
    "\n",
    "* Many thanks to HP Marshall (my advisor) for his mentorship and support. \n",
    "* Many thanks to e-Science institute and all organizing members for allowing me deploy/present this tutorial. A huge thanks to eveyone for listening."
   ]
  },
  {
diff --git a/book/tutorials/snowex-core/01_snowex_data_overview.ipynb b/book/tutorials/snowex-core/01_snowex_data_overview.ipynb
    "**Figure 2.** Map of the in situ field visits for the duration of SnowEx field campaigns (2017-2023). At this scale, points are overlapping, especially in the eastern Rocky Mountain region around Colorado. The total number of unique visits with recorded SWE are listed in the legend. Upper Right Bar chart of snow classes over the four SnowEx field campaign years. Counts represent in situ field visits. A range of sites in Boreal and Montane Forests occurred in open areas such as meadows and clearings. The snow classification colors match those used in [Sturm and Liston, 2021](https://journals.ametsoc.org/view/journals/hydr/22/11/JHM-D-21-0070.1.xml).\n",
    "\n",
    "<!-- ![](./content/01_snow-classes-barchart.png)\n",
    "**Figure 2.** Bar chart of snow classes over the four SnowEx field campagin years. Counts represent in situ field visits. A range of sites in Boreal and Montane Forests occured in open areas such as meadows and clearings. The snow classification colors match those used in [Sturm and Liston, 2021](https://journals.ametsoc.org/view/journals/hydr/22/11/JHM-D-21-0070.1.xml).  -->\n",
    "\n",
    "<!-- ![](./content/01_map-n-barchart.png)\n",
    "**Figure 2.** Bar chart of snow classes over the four SnowEx field campagin years. Counts represent in situ field visits. A range of sites in Boreal and Montane Forests occured in open areas such as meadows and clearings. The snow classification colors match those used in [Sturm and Liston, 2021](https://journals.ametsoc.org/view/journals/hydr/22/11/JHM-D-21-0070.1.xml). -->"
   ]
  },
  {
diff --git a/book/tutorials/snowex-core/02_snowex_data_descriptions.ipynb b/book/tutorials/snowex-core/02_snowex_data_descriptions.ipynb
    "\n",
    "![](./content/02_ak-boreal-vegclass.png)\n",
    "\n",
    "**Figure 9.** Represenative land cover classes for the boreal forests taken from the Southeast corner of the 5x5 m study plot. \n",
    "\n",
    "![](./content/02_ak-sampling-design.png)\n",
    "\n",
    "**Figure 10.** The study plot sampling design for the SWE/snow depth focused campaign. Field crews marked the Southeast corner and measured square-depths around the 5x5 m perimeter on a 1m interval. Snow depths were collected on a north and west transect of 20 m (15 m addition to the study plot perimeter) or a spiral pattern was used depending on depth instrument availability. The snow pit was excavated in the center of the study plot. SSA measurements were collected inside the ~1x1 m snow pit. SMP measurments were taken at the front of the snow pit and up to 50 m from the snow pit. \n",
    "\n",
    "____"
   ]
	We as members, contributors, and leaders pledge to make participation in our
	community a harassment-free experience for everyone, regardless of age, body
	size, visible or invisible disability, ethnicity, sex characteristics, gender
	identity and expression, level of experience, education, socio-economic status,
Check failure on line 8 in CODE_OF_CONDUCT.md GitHub Actions / quality-control `socio-economic ==> socioeconomic`
	nationality, personal appearance, race, religion, or sexual identity
	and orientation.
	"#site3 = LayerMeasurements.from_filter(date=dt3, site_name='Fairbanks', site_id='FLCF', limit=1)\n",
	"#site4 = LayerMeasurements.from_filter(date=dt4, site_name='Fairbanks', site_id='FLCF', limit=1)\n",
	"\n",
	"#Use pandas ot read in csv data\n",
Check failure on line 205 in book/tutorials/gpr_lidar/GPR_Lidar_HackweekTutorial.ipynb GitHub Actions / quality-control `ot ==> to, of, or, not, it`
	"#gpr_df_dt1 = PointMeasurements.from_area(pt=site1.geometry[0], crs=26906, buffer=10000,\n",
	"# type='two_way_travel',\n",
	"# observers='Randall Bonnell',\n",
	"## Acknowledgements\n",
	"\n",
	"* Many thanks to HP Marshall (my advisor) for his mentorship and support. \n",
	"* Many thanks to e-Science institute and all organizing members for allowing me deploy/present this tutorial. A huge thanks to eveyone for listening."
Check failure on line 460 in book/tutorials/NN_with_Pytorch/04_Building_And_Training_FFN.ipynb GitHub Actions / quality-control `eveyone ==> everyone`
	]
	},
	{
	"Figure 2. Map of the in situ field visits for the duration of SnowEx field campaigns (2017-2023). At this scale, points are overlapping, especially in the eastern Rocky Mountain region around Colorado. The total number of unique visits with recorded SWE are listed in the legend. Upper Right Bar chart of snow classes over the four SnowEx field campaign years. Counts represent in situ field visits. A range of sites in Boreal and Montane Forests occurred in open areas such as meadows and clearings. The snow classification colors match those used in [Sturm and Liston, 2021](https://journals.ametsoc.org/view/journals/hydr/22/11/JHM-D-21-0070.1.xml).\n",
	"\n",
	"<!-- ![](./content/01_snow-classes-barchart.png)\n",
	"Figure 2. Bar chart of snow classes over the four SnowEx field campagin years. Counts represent in situ field visits. A range of sites in Boreal and Montane Forests occured in open areas such as meadows and clearings. The snow classification colors match those used in [Sturm and Liston, 2021](https://journals.ametsoc.org/view/journals/hydr/22/11/JHM-D-21-0070.1.xml). -->\n",
Check failure on line 123 in book/tutorials/snowex-core/01_snowex_data_overview.ipynb GitHub Actions / quality-control `campagin ==> campaign` Check failure on line 123 in book/tutorials/snowex-core/01_snowex_data_overview.ipynb GitHub Actions / quality-control `occured ==> occurred`
	"\n",
	"<!-- ![](./content/01_map-n-barchart.png)\n",
	"Figure 2. Bar chart of snow classes over the four SnowEx field campagin years. Counts represent in situ field visits. A range of sites in Boreal and Montane Forests occured in open areas such as meadows and clearings. The snow classification colors match those used in [Sturm and Liston, 2021](https://journals.ametsoc.org/view/journals/hydr/22/11/JHM-D-21-0070.1.xml). -->"
Check failure on line 126 in book/tutorials/snowex-core/01_snowex_data_overview.ipynb GitHub Actions / quality-control `campagin ==> campaign` Check failure on line 126 in book/tutorials/snowex-core/01_snowex_data_overview.ipynb GitHub Actions / quality-control `occured ==> occurred`
	]
	},
	{
	"\n",
	"![](./content/02_ak-boreal-vegclass.png)\n",
	"\n",
	"Figure 9. Represenative land cover classes for the boreal forests taken from the Southeast corner of the 5x5 m study plot. \n",
Check failure on line 255 in book/tutorials/snowex-core/02_snowex_data_descriptions.ipynb GitHub Actions / quality-control `Represenative ==> Representative`
	"\n",
	"![](./content/02_ak-sampling-design.png)\n",
	"\n",
	"Figure 10. The study plot sampling design for the SWE/snow depth focused campaign. Field crews marked the Southeast corner and measured square-depths around the 5x5 m perimeter on a 1m interval. Snow depths were collected on a north and west transect of 20 m (15 m addition to the study plot perimeter) or a spiral pattern was used depending on depth instrument availability. The snow pit was excavated in the center of the study plot. SSA measurements were collected inside the ~1x1 m snow pit. SMP measurments were taken at the front of the snow pit and up to 50 m from the snow pit. \n",
Check failure on line 259 in book/tutorials/snowex-core/02_snowex_data_descriptions.ipynb GitHub Actions / quality-control `measurments ==> measurements`
	"\n",
	"____"
	]